Python bivittatus (Burmese python): 103058426
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Entry
103058426 CDS
T03091
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi03015
mRNA surveillance pathway
pbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103058426 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
103058426 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbi03019
]
103058426 (PABPC1)
03041 Spliceosome [BR:
pbi03041
]
103058426 (PABPC1)
Messenger RNA biogenesis [BR:
pbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103058426 (PABPC1)
mRNA cycle factors
Stress granule specific factors
103058426 (PABPC1)
Spliceosome [BR:
pbi03041
]
Complex C
Other components
Complex C specific factors
103058426 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_5
RRM_10
RRM_occluded
RRM_7
RBD_RDR6
RRM_3
YflT
POP1_C
Motif
Other DBs
NCBI-GeneID:
103058426
NCBI-ProteinID:
XP_007443132
UniProt:
A0A9F2RC58
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV
CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT
NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM
NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR
KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK
EERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPTSQITQL
RPSPRWAAQGARPHPAFQNMPGAIRPTAPRPPFSTMRPASSQVTRVMSTQRVANTSTQTM
GPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNTQPQVAMQQPAVHVQGQEPLTASML
ASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEA
VAVLQAHQAKEAAQKAVNNPAGVPSV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacgtcattaaaggcaagccagtgcgtatcatgtggtctcaacgtgatcca
tctctacgaaaaagtggtgttggcaacattttcattaaaaacttggataaatctattgat
aataaagctctgtatgatacattttcagcttttggaaacatcctctcttgtaaggtcgta
tgtgatgagaatggatccaaaggctatgggtttgtacattttgaaacacaagaagctgca
gaaagagctattgaaaaaatgaatggaatgctgcttaacgatcgtaaagtatttgttgga
aggtttaaatcacgcaaagaacgggaagcagagcttggagctcgtgctaaggaattcact
aatgtttacatcaagaattttggagaagacatggatgatgagagactgaaagaactcttt
ggcaagtttggacctgccttgagtgtgaaagttatgactgatgaaagtggaaaatccaaa
ggctttggctttgtcagttttgaaagacatgaggatgcccaaaaagctgtagatgagatg
aatggaaaagaactcaatggaaagcaaatatatgttggtcgagctcagaaaaaagtcgag
agacaaacagagcttaaacgcaaatttgaacaaatgaagcaggataggattacaagatac
cagggtgtaaatctttatgtgaaaaatttagatgatggaattgatgatgaacgcttacgc
aaagaattttcaccatttggcacaattactagcgcaaaggtcatgatggaagggggccgc
agtaaagggtttgggtttgtgtgcttttcttcaccagaagaagcaaccaaagcagttaca
gaaatgaatggtagaattgtggccaccaaaccactatatgtagctttagctcaacgtaaa
gaggaacgccaagctcacctcaccaaccaatacatgcagagaatggcaagtgtgagagca
gtgcccaatcctgtcatcaacccttaccagccagcacctccatcaggttatttcatggca
gctatcccacagacacaaaaccgtgcagcctactatcctactagccagattactcaactt
agaccaagtcctcgctgggctgctcagggtgccagacctcatccagctttccagaatatg
ccaggtgccatccgccctacagctcccagaccaccatttagtaccatgaggccagcttca
tcacaagttacacgagtaatgtcaacacagcgtgttgcaaacacatcaacacagaccatg
ggtccgcgtccagcagctgctgctgctgcagccactccagctgtgcgcactgttccacag
tataagtatgctgcaggtgttcgcaatcctcagcagcatcttaacacacagcctcaggtt
gctatgcagcagcctgctgtccatgtgcaaggtcaggaacctttgactgcttccatgttg
gcttctgcccctccacaagaacaaaagcagatgttgggagaacgtctgttccctcttatc
caagccatgcaccctactttggcgggtaaaataactggtatgttgctagagattgataac
tctgaacttctccatatgcttgagtctcccgaatctcttcgttcgaaggttgatgaagct
gtagccgtactgcaggcccatcaagctaaagaagctgctcaaaaagcagttaacaatcca
gcaggagttccaagcgtctaa
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integrated database retrieval system
