Python bivittatus (Burmese python): 103062130
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Entry
103062130 CDS
T03091
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pbi
Python bivittatus (Burmese python)
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbi03000
]
103062130 (RC3H1)
04121 Ubiquitin system [BR:
pbi04121
]
103062130 (RC3H1)
Transcription factors [BR:
pbi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103062130 (RC3H1)
Ubiquitin system [BR:
pbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103062130 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-RING_2
zf-C3HC4_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
FYVE
PaaA_PaaC
Baculo_IE-1
zf_CCCH_4
Vesi_VP2
zf-RING_4
zf-RING_6
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
103062130
NCBI-ProteinID:
XP_007425211
UniProt:
A0A9F2NQ96
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IEHLPVNSALLQLVGAQMPEQQPITLRSGAEDTKHYEEARKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLTRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRRECPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPAAAIISDE
ASVDLPNRKPSTLPNGIVSPGSAVTQLISRGTDSSYDSVMKPGKMDHHSNSAPGSPPDLL
EPVSKSSHPVPPRGPTDLPPISVGKQLQMVPRGSQLYPAQQTDVFYPDPRGAAPPFEPPP
YQAGVYYPPAQSLQCMSRFVRPPSSVPEPGPPFVEQHYAPYLQDRIMNSQYSTQPQQYPP
MGQPVYPPHYDSRRVYPPAQPYQREEIIRGSPVPIEISPPAVSPYVPETRDRYQQVEGYY
PVGPHLNQIRPSYHREPYSRPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFASSPTL
PHSLHTDEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDIVAVGLVEMVN
VDSKGMRDQRLDLQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNPGPMQAMAVQ
GASAKPVNVSDYSPYGTHSAWGGSSYSPHQNVPSQGRLGDRERLSMTDIANHGKSSEREQ
QLRLELQQLNHQISQQTRGLEAVSNRLLLQREATPLAGQPQPPPPPPKWPGMISSEQLSL
ELHQVEREIGKRTRELSMESQSSLDVKNKVNASKQTENGQQSKVPAEDLALTFSSDLPNG
SAPTQEIISLLSNKTTALNLSEDTETGAGDQDTQRTGATPTSAP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgccctatttgcacacaaaca
ttcgacgaaacgatccggaagcccatcagtctgggttgtggccacacagtctgcaagatg
tgcctgaacaagctccatcggaaagcgtgtcctttcgaccagaccactatcaatacagac
atagaacaccttcctgtgaattcagctttactgcagcttgtgggtgctcagatgccagaa
cagcagccgataactctacgcagtggtgctgaagatactaaacattatgaggaagctagg
aagtgtgtggaagaactagccttgtaccttaaaccgctcagcagtgcaagaggtgtggga
ttgaacagcacaactcagagtgtgcttagtcgccccatgcaaaggaagcttgtgacatta
gtccattgccaactggtggaagaagaagggcggatccgagctatgcgtgcagcacgatcc
ctgggtgaaagaactgttactgagcttattcttcagcaccagaatccccagcaactatct
tcaaatctttgggctgcagtgagggctagaggctgtcagttccttggaccagcaatgcag
gaagaagccctgaagctagttcttttagctttagaagatggatctgctttatctcgaaaa
gtcttggttctttttgtggtacagaggttggagccacgatttcctcaggcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcctgtttcaaggtgactaaacgt
gatgaggattcctccctaatgcagctgaaggaggaattccgaacatatgaagctctgagg
cgagaacatgattcccaaattgtacaaattgctatggaggctggtttgcggatagctcca
gatcagtggtcctcattgctctatggagaccagtctcacaaatcccacatgcagtccatt
attgacaagttgcagaccccggcctcttttgcacagagtgttcaggaattaaccattgct
ctccagaggactggtgatccagccaatctgacccggcttcgaccccatcttgaactcctt
gcaaatattgatcccagtccagatgccccacctcccacatgggaacagcttgagaatgga
ttagttgctgtacggactgtggtacatggactggttgattacatccagaatcacagcaaa
aaaggagcagaccagcaacagcctcctcaacacagcaagtacaagacatatatgtgccga
gacatgaagcagagaagagaatgcccccgtggggccagctgcacctttgcacactcacag
gaagaactagaaaaatttcgaaaaatgaacaaacgtctagttcctcgaagacctttgagt
gcctccttaggtcaactaaatgaagtaggcctaccagcagcagctattatctcagatgaa
gcatcagtggacttacccaatagaaaaccctctaccttgccaaatgggattgtttcacca
ggcagtgcagtgacacaacttatctctcgtgggaccgactccagttatgactcagtcatg
aaacctgggaagatggaccaccatagtaacagtgcccctggatcacctcctgatttgctg
gaacctgtttctaagagctctcacccagtgcccccccgaggacctacagacttgcctcca
atatcagtaggtaaacagctccaaatggttccacgaggctcccagttgtacccagctcag
caaactgatgtgttctatccagatcctcgaggagcagctcccccatttgagcctccacct
tatcaagcaggtgtatattatcctccagctcagtcattacagtgtatgtctcgatttgtc
cgacctccatcatctgttcctgaaccgggtcctccttttgtagagcaacattatgcaccc
tatctccaagatcgcatcatgaactcacagtacagcacacagccacagcaataccctcca
atgggtcaacctgtatatcctccccattatgacagcagacgtgtgtatcctcctgcccag
ccataccaacgggaagagattatccgaggaagtcctgtgccaattgaaatttctccacct
gctgtatcaccatatgtacccgaaacaagagatagatatcaacaagtggagggctactat
ccagttggaccacatctgaatcagattagaccttcatatcatagagagccttatagtcgg
cctccccctcaaccacaccctagtctagatgaattgcatcgaaggcgaaaggagatcatg
gcccagctagaagaaagaaaggtcatctccccaccaccatttgcatcatcaccaaccctg
cctcattctttacacactgatgagtacttggatgaagacctgaaggtagcaggcaaatac
aaaggaaatgattacagccagtattctccctggtcgtgtgacactattggctcctacatt
ggaaccaaagatgcaaaacccaaagatattgtggcagtgggtcttgtggagatggtgaac
gtggacagtaagggaatgcgagaccaacgtttggatttacaaaggagagcagcagagact
ggtgatgatgatcttattccatttggagatcggcctacggtatcaaggtttggtgccatc
tcacgtacctccaaagcaatgtaccagaaccctggccccatgcaagccatggcagttcaa
ggggcttctgcaaaaccagttaatgtgtcagattacagcccatatggaacacacagtgca
tggggaggctcatcctattcaccccatcaaaatgtaccttctcagggacggcttggtgac
agggagagattatctatgacagacattgctaaccatgggaaatcatctgagagagaacag
cagcttcgtcttgaactgcagcagttaaaccatcagataagccagcagacacgaggactg
gaggcggttagtaacaggctgctgttgcagagggaagcgacccctttggcaggccaacca
cagcccccaccgccacctcctaagtggcctggaatgatctcaagtgaacagctgagcttg
gagctgcaccaggtggagagggaaatcgggaagagaacccgggaactaagcatggagagc
cagtcttcattggatgtgaaaaacaaagtaaatgctagtaaacagactgaaaatggacag
caaagcaaggtaccagctgaggatcttgctctaacattcagcagcgatcttccaaatgga
tctgccccaacccaagaaattataagccttctgtcaaacaaaactacagctctgaacttg
tcagaggacaccgaaacgggagcaggtgaccaggatacccaaagaaccggagcaacaccc
acctctgctccttga
DBGET
integrated database retrieval system
