Python bivittatus (Burmese python): 103063098
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Entry
103063098 CDS
T03091
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pbi
Python bivittatus (Burmese python)
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbi03016
]
103063098 (RTCB)
Enzymes [BR:
pbi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
103063098 (RTCB)
Transfer RNA biogenesis [BR:
pbi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103063098 (RTCB)
Prokaryotic type
tRNA splicing ligases
103063098 (RTCB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
103063098
NCBI-ProteinID:
XP_007427932
UniProt:
A0A9F2NQY0
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSRSYNDELQYLDKLDKNCWRIKKGFVPNMNVEGVFYVNDPLEKLMFEELRNACRGGGAG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDI
NCGVRLLRTNLDECDVQPVKEQLAQSMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDDIYNE
YAARKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
QEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDMHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT
ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTD
VVNTCHAAGISKKAIKLRPIAVIKG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagctacaacgatgaattgcaatatttggataaactggataagaactgctgg
cgcatcaagaaaggatttgtgccaaacatgaacgtggagggtgtattctacgtgaatgat
ccattggagaagttgatgtttgaagaactaagaaatgcatgccgaggtggaggtgctggt
ggctttttaccagccatgaaacaaattggaaatgtagctgcactgcctggtattgttcat
cgatctattggacttcctgatgttcattcagggtatggctttgctattggcaatatggca
gcctttgatatgaatgacccagaagcagtagtttcaccaggaggtgtagggtttgacatt
aactgtggtgttcgattactgcggaccaaccttgatgagtgtgatgtccagccagtgaag
gagcagcttgctcagtccatgtttgaccacattcctgtaggggtgggatccaagggtgtc
atccccatgaatgccaaggacttggaggaagctttagagatgggagtagactggtcccta
cgagagggctatgcctgggctgaggataaagaacattgtgaagaatatgggaggatgctg
caagctgatccaaataaggtgtcggcaagagctaaaaaaagggggttacctcagctgggg
actttgggagcaggaaaccactatgctgagatacaggttgtggatgacatttataatgaa
tatgctgccagaaagatgggtatagaccataagggacaagtgtgtgtgatgatccacagt
ggaagcagaggccttggccaccaagtagctacagatgccctggtagctatggaaaaagca
atgaaacgagataagatcatagtgaatgaccgccagttggcatgtgccaggatagcttcc
caggagggccaagattatttgaaagggatggcagcagctggaaactatgcatgggtcaat
cgttcctccatgacttttcttactagacaggcatttgctaaagtcttcaacaccacccct
gatgatctggacatgcatgtaatctatgatgtgtctcacaacattgcaaaagtagagcaa
cacgtggtagatggaaaagaacggaccctgttggtacacaggaaaggatcgaccagagca
ttccctcctcaccaccctcttatagctgtcgattaccaactgaccggccagccagtattg
attggtggaacaatgggaacttgcagttacgtccttactggtactgaacaaggcatgact
gaaacctttggaaccacctgccatggagcgggtcgtgcattgtcccgtgccaaatctcga
cgtaacttggatttccaggatgtgttggacaagttggcagatatggggattgcaatccgt
gttgcttctcctaaactagtcatggaagaagcgcctgaatcttataagaatgtgacagat
gtggttaacacctgccatgcagctggcatcagcaagaaagcaattaaactgaggcccatc
gcagtaatcaaagggtaa
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integrated database retrieval system
