Python bivittatus (Burmese python): 103064609
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Entry
103064609 CDS
T03091
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X2
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pbi
Python bivittatus (Burmese python)
Pathway
pbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103064609 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbi03041
]
103064609 (DHX38)
Enzymes [BR:
pbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103064609 (DHX38)
Spliceosome [BR:
pbi03041
]
Complex C
Other components
Step II factors
103064609 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
Flavi_DEAD
nSTAND3
PhoH
ResIII
AAA_30
SLFN-g3_helicase
SRP54
AAA_16
AAA_7
Microtub_bd
Motif
Other DBs
NCBI-GeneID:
103064609
NCBI-ProteinID:
XP_007431839
UniProt:
A0A9F2QZM8
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MMDEGYDEFHNPLAASSEEYVRKREQHLQKQRQKRISAQRRQINEDNERWETNRMLTSGV
VHRLEVEEDFEEDNAARVHLLVHNLVPPFLDGRIVFTKQPEPVVPVKDATSDLAIIARKG
SLLVRKHREQKERKKAQHRHWELAGTKLGNIMGIKKEEEEESGQALAEDGTVDYRTEQKF
AGHVKEKSEASSEFAKKKSIVEQRQYLPIFAVQQELLTVIRDNSIVIVVGETGSGKTTQL
TQYLHKDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMSVALGEEVGYAIRFEDCTSESTVI
KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA
TMDAEKFAAFFGNVPIFHIPGRTFPVDVLFSKTPQEDYVEAAVKQALQVHLSSAPGDILI
FMPGQEDIEVTSEQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT
NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQC
FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY
QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFY
RPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNEHFIHAKAMRKVREVR
AQLKDIMVQQHMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMRCHLHPTS
SLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQESRRRA
KEEASAMEEEMALAEEQLRARREEQERCNPVGSVRSTKIYTPGRKEQGQLATPRHTPARF
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagggctacgatgagttccacaaccccctggctgcgtcctcagaggaatac
gtgaggaagcgagagcagcacttgcagaagcaaaggcagaagcgcatctcggctcagcgc
aggcagatcaatgaggataatgagcgctgggagaccaaccgcatgctgacaagtggtgtg
gtacaccggctggaggtggaggaggactttgaggaggataatgctgccagagtacacctt
ctggtgcacaacttggtgcctcctttccttgatggacgcattgttttcaccaagcagcct
gagcctgttgtccctgtcaaagacgccacctctgacttggctatcattgcccggaagggc
agcctgttggtgcggaagcaccgggagcaaaaagagcgtaaaaaggcccagcacaggcac
tgggagctggcaggtacgaagcttggcaacataatgggcataaagaaggaggaggaggag
gaatcggggcaggccctggccgaggatggcacggtggattacaggacagaacagaagttt
gctggacacgtgaaagagaagagtgaggcgagcagcgagtttgccaagaagaagtcaatt
gtggagcagaggcagtacttgcccatcttcgctgttcaacaagagcttttgacagtgatc
agggacaacagcattgtgattgtggtgggagagacgggcagtggcaaaacaacgcagttg
acccagtacctacacaaggacggctacacggactacggcatgattggctgcacgcagcca
cgccgagtggcagctatgtccgtggccaagcgcgttagcgaggagatgagcgtggccctc
ggggaggaggtgggctatgccatccgctttgaggactgcacttcagagagcactgtgatt
aagtacatgaccgacgggatcttgcttcgcgagtctctgcgtgaagctgaccttgaccac
tacagtgccatcattatggatgaggcgcacgaacgctcgctcaacacagatgtgctgttt
ggcctcctgcgagaagtggtagcccgacgctcggatctgaagttgattgtcacctcagcc
accatggatgcagagaagtttgcagctttctttggaaatgtgcccatcttccatatccca
ggtcgcacgtttcctgttgatgttctctttagcaagactccgcaagaagactacgtggag
gcagcagtgaagcaggccttgcaagttcatctctccagtgcccctggagatatccttatt
ttcatgccgggccaggaagacattgaggtcacatctgagcagattgtggaacatctggaa
gagttggaaaatgcacctgctctagctgtactaccgatctactctcagctgccttcagat
ttgcaggccaagatcttccagaaggcaccagatggagtcaggaaatgtatcgtggccacc
aatatcgcagagacttcgttgacagttgatgggatcatgtttgtgatcgactccgggtat
tgcaaactgaaggttttcaacccacggattggcatggatgccctgcaaatctatccaatc
agccaggctaatgcaaatcagcgttctggccgagctggaagaacaggcccaggtcagtgt
ttcagactgtacacccagagcgcctacaagaatgagctcctgaccaccactgtcccagag
atccagcgtaccaatctggccaatgtggtgctgcttctcaagtctttgggggtacaggac
ctgctgcagttccactttatggatccccctcctgaagacaacatgctcaactcaatgtac
cagctatggattcttggggcacttgataacacaggtggtctgacatcaaccggacgcctg
atggtggaatttccccttgatcctgccctctccaagatgctgattgtttcctgtgacatg
ggctgcagctctgagatcctgctgattgtctccatgctctctgtcccagccattttctac
cggccaaagggccgggaggaagaaagtgaccaggtgcgagagaagtttgctgttccagag
agcgaccacttgacttacctgaacgtttatctacagtggaaaaacaacagctattcgaca
ctctggtgcaatgagcacttcatccatgcaaaggctatgcgcaaggtgcgggaggtacga
gcacagctgaaggacattatggtgcagcagcacatgagcttggcttcctgtggcactgac
tgggacgtggttcgcaagtgcatctgcgcagcttatttccaccaggctgcaaaactgaag
ggcattggggaatacgtcaacatccggacggggatgcgctgtcacctgcaccccaccagc
tcgctttttggaatgggctacactcctgactacattgtctaccatgaactggtgatgacc
accaaggagtacatgcagtgtgtcacagctgtggatggtgaatggctggctgaattgggg
cccatgttctacagcatcaagcatgctggcaagtctcgtcaggagagccggcggcgagcc
aaggaggaagcatctgccatggaagaggagatggctctagctgaagagcagctccgtgcc
cgcagagaagagcaggagcgttgtaacccggtgggcagtgtcaggtccacaaagatctac
acgccagggcgcaaggagcagggccagctggccacgcctcgccacacgccagctcgcttt
ggtctgtag
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integrated database retrieval system
