Paraclostridium bifermentans: KXZ80_00725
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Entry
KXZ80_00725 CDS
T07479
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KXZ80_00725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbif03021
]
KXZ80_00725
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_00725
Enzymes [BR:
pbif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KXZ80_00725
Transcription machinery [BR:
pbif03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KXZ80_00725
DNA repair and recombination proteins [BR:
pbif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KXZ80_00725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF2325
Motif
Other DBs
NCBI-ProteinID:
UAG18292
LinkDB
All DBs
Position
96377..97324
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPRVDIIEISEDHRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNSIRIDG
VLHEFTTVSGVKEDVTEIILALKELSATIDGEGSRTLKIEAQGPCTVTGADIICPPDVEI
ISKDLHIATLDDNSKLNMEISVNKGRGYVSSEDNKTEHMPIGVLPVDSIYTPVEKVSYHV
ENTRVGQKSDYDKLILEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSNVEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANRSEEDMMKVRNLGKKSLEEVI
QKLEELGLNLKPSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatagaaaaaccaagagtagatataattgaaattagcgaagaccatagatat
ggtaaattcgttatagagcctctagaaagaggatatggaataactataggtaatgcacta
agaagaatattattatcttctttaccaggagtagctgttaactctataagaatagatgga
gttcttcatgaattcacaacagtgtctggtgttaaagaagatgttacagaaataatatta
gcattaaaagaattatcagctactatagatggtgaaggaagtagaacacttaaaatagaa
gcgcaaggaccatgcacagtaacaggtgctgacataatatgtcctccagatgttgaaata
ataagtaaagatttacatatagctacgctagatgataattctaaacttaacatggaaata
tctgttaacaaaggaagaggttatgtatcttctgaagacaataaaacagagcatatgcct
ataggagttcttcctgtagactcaatatatactcctgttgaaaaagttagctaccatgta
gaaaatactagagttggtcaaaaatcagattacgataaattaatacttgaagtttggact
aatggaagtataaatcctcaagaaggaatatcacttgcagctaaggttctagttgaacat
ctaaatctattcattgatttaacagagcatgtaagcaatgttgaaataatggtagaaaaa
gaagaagatcaaaaagaaaaagttctagagatgactatcgaagaacttgacttatcagtt
agatcttacaactgtttaaagagagcgggaataaatacagttgaagaattagctaataga
tctgaagaagacatgatgaaagttagaaacttaggtaaaaaatcattagaagaagttatc
caaaagttagaagaacttggattaaatcttaaaccaagcgaagagtaa
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