Paraclostridium bifermentans: KXZ80_03040
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Entry
KXZ80_03040 CDS
T07479
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03030
DNA replication
pbif03410
Base excision repair
pbif03420
Nucleotide excision repair
pbif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KXZ80_03040 (polA)
03410 Base excision repair
KXZ80_03040 (polA)
03420 Nucleotide excision repair
KXZ80_03040 (polA)
03440 Homologous recombination
KXZ80_03040 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbif03032
]
KXZ80_03040 (polA)
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_03040 (polA)
Enzymes [BR:
pbif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KXZ80_03040 (polA)
DNA replication proteins [BR:
pbif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KXZ80_03040 (polA)
DNA repair and recombination proteins [BR:
pbif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KXZ80_03040 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KXZ80_03040 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
XPG_I
Imm50
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UAG18698
LinkDB
All DBs
Position
619317..621941
Genome browser
AA seq
874 aa
AA seq
DB search
MEKTLIIIDGNSIVNRAFYALPDLTNKKGLHTNAIFGFTNMLFKLIDTYKPTHISVAFDK
KAPTFRHLEYKEYKAGRKKMPDELKQQLEPLKNLLDAFNINRLEIEGYEADDIIGTVSLK
AEQDGYKVYIVTGDKDAIQLASKTTTTLITKKGVGEVEEYDFNGVEEKYGMTPTQFIDLK
GLMGDKSDNIPGVPGIGEVTGIKLIKEFGSIENIIENIDSVKGSPRKKIEENKELAIMSK
RLATIIRDVPIDFDLEKLEFGNYDKSKLIEVFNELDFNSLIARLDSNAEELKVIVNKLED
VKEFINKAKNSKKLILKTISKSGNILEKNIMQIYLSVDGEELFWVDESQIDEIKELLVDE
DLRVYGYNLKEDYIALRPYGISLSNIYFDIAIAEYLIDSSSSNYTYDSIAMNYFGQKIKS
SEELLGKGVKAKQYEDLEKEELDNTIGSIVQLVEKVTPKMEEKLVDMDMDGLFYHVEMPL
VEVLGYMEYEGVMVDKDKLIELGEEFKISIDKLEKDIYNLAGEEFNINSPKQLGVILFEK
LELPVIKKTKTGYSTNAEVLEHLSDKHEIIDKITEYRQIVKLKSTYVDGLINIINPISHR
IHSSFNQTITTTGRISSTDPNLQNIPVRLELGRNIRKVFIADKGFKLVDADYSQIELRVL
AHMSQDEHMIDAFNHNVDIHTKTASQVFGIDINDVTSEQRSAAKAVNFGIVYGISDFGLA
KNLHIPVKEAKNYIDSYLNTYEDIKSYMDSTIEEAKEDGYVKTILNRRRYIPEIKSSNTI
LKNLGKRLAMNAPIQGSAADIIKIAMVNVHKKLEERDLKSKLVLQVHDELIIECIEDEVE
EVSKIVKDEMEHAVSMDVNLDVDLNTGYSWYETK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaacgttaattataatagatggaaattcaattgttaatagggcattttatgca
ttgcctgatttaactaataaaaaagggctacatacaaatgcaatatttggtttcacaaat
atgctatttaagttgatagatacatataaacctacacatattagtgttgcatttgataaa
aaagctccgacttttagacatttagagtataaggaatataaagctggaagaaaaaaaatg
ccagatgaattaaaacaacagttagaaccgttaaaaaatttattagatgcatttaatata
aatcgtttagaaattgaaggatatgaagctgatgacataataggtactgtatctttaaaa
gcagagcaagatggatataaagtttatatagtaacaggagacaaagatgcaattcaatta
gcttcaaagactacaactacgcttataactaaaaaaggagtaggagaagttgaagaatat
gatttcaatggagttgaggaaaagtatggaatgacacctactcaatttatagatttaaaa
gggcttatgggagataagtcagataacatacctggagtacctggaattggagaggttaca
ggtattaaacttataaaagaattcggaagtattgaaaatataatagaaaatattgattca
gtaaaaggaagtcctaggaaaaaaatcgaagaaaataaagagcttgctataatgagtaaa
aggttagctacaataattagagatgttccaattgattttgatttagaaaaattagaattt
ggaaattatgataagtcaaaactaatagaggtatttaatgaacttgatttcaacagctta
atagctaggttggattcaaacgcagaagaattaaaagtaatagtaaataaacttgaagac
gttaaagaatttataaacaaagcaaaaaatagtaaaaagctaatattaaaaactatttct
aaaagcggaaatattctagaaaaaaacataatgcaaatttatttaagtgttgatggagaa
gaattattttgggttgatgaaagtcaaatagatgaaataaaggaactattagtagatgaa
gatttaagagtttatggatataacttaaaagaagattatatagctctaagaccttatgga
atatctttaagtaatatttactttgatatagctatagcagagtatttaatagactctagc
agctctaactatacatatgattcaattgcgatgaactattttggacaaaaaataaaatca
tctgaagaattgttagggaaaggcgttaaagcaaaacaatatgaagatctagaaaaagaa
gaactagacaatacaattggaagcatagttcaattagttgaaaaagtaactcctaaaatg
gaagaaaaattagttgatatggatatggacggtctgttttaccatgtagaaatgccttta
gtagaagtgctaggatatatggagtatgaaggtgttatggtagataaagataaattaata
gaattaggtgaagaatttaaaatatctatagataaactagaaaaagacatatacaatctt
gcaggagaagaatttaacattaattctccaaaacagttaggtgttattttatttgaaaaa
ttagaacttccagtaattaaaaagactaaaacaggatattcaactaatgctgaagtatta
gaacacttaagtgataagcatgaaattatagacaagataactgaatatagacaaattgta
aagttaaaatctacttatgtagacgggcttataaatataataaatcctataagtcacaga
atccattcatcatttaatcaaacaataacaacaactggaaggatttcatctacagatcct
aacttacaaaacatacctgtaaggttagaattaggtagaaatataagaaaagtatttata
gcagataaaggctttaaattagtagatgcagactactcacaaatcgaattaagggttcta
gcacatatgagtcaagatgagcatatgatagatgcatttaaccataacgtagatattcat
actaaaactgcatcacaagtatttggtattgatataaatgatgtaacaagtgagcaaaga
agtgccgcaaaagcagtaaactttggtatagtatatggtataagtgattttggattagct
aaaaatttacatataccagttaaggaagcaaaaaactatattgatagttacttaaatact
tatgaagatataaaatcatatatggatagtacaattgaagaagcaaaagaagatggatac
gtaaaaactattttaaatagaagaagatatataccggaaataaaatcttctaatacaata
cttaaaaatttaggaaaaagattggctatgaatgcgccgatacaaggaagtgccgctgac
atcataaaaatagctatggttaatgtgcataaaaaattagaagaaagagatttaaaatcc
aaattagtgcttcaagttcacgatgaacttataattgaatgcattgaagatgaagtagaa
gaagtatctaagattgtaaaagatgaaatggaacatgctgtatctatggatgttaattta
gatgtagatttaaataccggatactcttggtatgaaacaaagtag
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