KEGG   Paraclostridium bifermentans: KXZ80_04355
Entry
KXZ80_04355       CDS       T07479                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
pbif  Paraclostridium bifermentans
Brite
KEGG Orthology (KO) [BR:pbif00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbif03016]
    KXZ80_04355 (truB)
Enzymes [BR:pbif01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     KXZ80_04355 (truB)
Transfer RNA biogenesis [BR:pbif03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    KXZ80_04355 (truB)
 Prokaryotic type
    KXZ80_04355 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA
Other DBs
NCBI-ProteinID: UAG18947
LinkDB
Position
892938..893843
AA seq 301 aa
MNKIVNILKPTGMTSHDVVGRVRKILNIKKVGHTGTLDPDASGVLPICIGKATKVSELIL
NKDKSYICELTLGITTDTYDSSGEIVERSEVKDINIEKLEQAFDTQRGEIKQLPPMYSAL
KVNGKRMCDLVRAGRAEEITLKYRDVNIKELNILSFKENKVMFYVKCSKGTYVRSICYDI
GKELGCGGHMSFLLRTSSGKFNIDNAITLDQLEELYKENMLDEHLYDIDYVLSNFNSIHI
NPLAVKSYVNGAIVYNKGFLKGDFKETDEFVRVYSEGKFLGVGKFLKVDGTLCLKSDKLF
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacaaaatagtaaatatactaaaacctacgggaatgacatctcatgacgtcgtaggt
agggttagaaaaatattaaatataaaaaaagttggtcacacaggtacccttgatccagat
gcatcaggggtactacctatatgtataggaaaagctacaaaggttagtgaacttattctt
aataaggataagtcatacatctgtgaactgactttaggaataactacagatacttatgac
tcatcaggtgaaattgtagaaagatctgaagttaaagatataaatattgaaaaacttgaa
caagcatttgacactcaaaggggagaaattaaacaacttcctcctatgtattcggcttta
aaagtaaatggaaaaagaatgtgtgatttagttagagctggaagagctgaagaaattact
cttaaatatagagatgttaacataaaggagcttaatatcttatcatttaaagaaaataaa
gtaatgttttatgttaagtgttctaaaggaacttatgtaagaagtatatgctacgatata
ggtaaagagttaggttgtggtggtcatatgtcattcttacttagaacttcatcaggaaaa
tttaatatagacaatgctataactttagatcaattagaagaactttataaagaaaatatg
ttagatgaacatttatatgatatcgattatgttttatcaaattttaatagtatacatata
aatccgcttgcagttaagtcttatgtaaatggagctatagtttacaataaaggtttttta
aaaggtgattttaaagaaactgatgaatttgtaagagtatatagtgaagggaaattttta
ggagtaggcaaattcttaaaagttgatgggacattatgcttaaaaagtgataaactattt
gtatag

DBGET integrated database retrieval system