Paraclostridium bifermentans: KXZ80_07355
Help
Entry
KXZ80_07355 CDS
T07479
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KXZ80_07355 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbif03019
]
KXZ80_07355 (recQ)
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_07355 (recQ)
Enzymes [BR:
pbif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KXZ80_07355 (recQ)
Messenger RNA biogenesis [BR:
pbif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KXZ80_07355 (recQ)
DNA repair and recombination proteins [BR:
pbif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KXZ80_07355 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UAG19516
LinkDB
All DBs
Position
1562406..1564841
Genome browser
AA seq
811 aa
AA seq
DB search
MNIKPLDVLSKYYGYPEFRKGQEDIINEIIKGNDILAIMPTGGGKSICYQIPSLILNGLT
IVISPLISLMKDQVDSLKTMGIDATFINSSLSTMELSNIIKNIDDDKYKIIYIAPERLDS
YEFSNLIKSKEVSQIAIDEAHCVSQWGHDFRTSYRKISQFINNLEKRPIITAFTATASVE
VRNDIIKLLELNNPKLFITGFDRENLTITIEKASNKNKYLLEYINNHKSESGIIYAATRK
EVDKIYEGLNKRGYNVSRYHAGLGAEERKLNQESFIKDDVSVMVATNAFGMGIDKPNIRY
VIHYNMPQSIENYYQEIGRAGRDGEKSECVLLFTPGDVHIQKYLIEIGTENPNRKNIQYK
KLRDMSDLVYSNDCYRKSIINYFGEDFKEECGNCSNCLDNGSLVDKTLDAQKVISCIARM
KRSFGITMIIDVLRGSKNKKVLQFGFDELSTYGIMKHYSSNDLKTFINTLISHGFIDSID
GTYPTIKLNENSMKTLKGDIKVEFKESKVSKNLEISNELYDTLKQIRYNISKEENIAPYM
IFGDGTLKVMSSKYPITKESMLKIPGVGNIKYEKYGETFKSAIIKYVEENNIKIQGDFIS
SQDEKLNFIDIKTDKELYEKLYIKRSELAKNEGVLPTMIISKNSLKEISGRYPSNEEQLN
DISGFGPVKVKKYGHVFLDIVNRYTEENNISEIWKEKNRLKVIIDGDSRTNEEIALDMLR
ESKALEYISNEIEVSISTILGYVTDMIKNGSEIDFKVNLEKYYTEEDEEHILRICEEEGI
DKISLIKKKLPDNIKYESIRAVILKKYYNLM
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaagcctttagatgtactatctaaatattacggatatccagaatttagaaaa
ggtcaagaagatataataaacgaaattataaaaggaaatgatattctagcgatcatgcca
actggaggaggaaaatctatatgctatcaaataccatctcttattttaaatggtctaacg
atagttatatctcctcttatatctcttatgaaagaccaagtagattcgttaaagacaatg
ggaatagatgcgacttttataaatagttctttatctacaatggaactttcaaatataata
aaaaatatagatgatgataaatataaaattatatatatagcaccagagagattagattca
tatgaattttcaaatttaataaaatctaaagaagtaagccaaatagctatagacgaagct
cactgcgtatctcaatggggacatgattttagaactagctacagaaaaatatctcaattc
ataaataacttagaaaaaaggcctataattactgcatttacagcgacagcgtcagtggaa
gtaagaaacgatattataaaattattagaacttaataaccctaaattatttataactggt
tttgacagagaaaatttaactataactatagaaaaagcttcaaataaaaataagtatcta
ttagagtatattaataatcataaatctgaaagtggaattatatatgcggcaaccagaaaa
gaagtagataagatatatgaaggattaaataaaagagggtacaatgtatctaggtatcat
gcaggacttggagctgaggaaagaaaattaaatcaagaaagttttataaaagatgacgta
agtgttatggttgctaccaatgcatttggaatgggaatagacaaacctaatatacgatat
gtgatacattataacatgccacagagtatagagaattactatcaagaaatcggtagagct
ggtagagatggtgaaaaaagtgaatgtgtacttttatttacgcctggagatgtacatata
caaaaatatttaattgaaattggtacagaaaacccaaatagaaaaaacattcaatataag
aaattaagagatatgtcagatttagtatatagtaatgattgttatagaaaaagtattata
aattactttggagaagattttaaagaggaatgtggaaactgtagtaattgtttagataat
ggaagcttagttgacaaaactttagatgctcaaaaggttatttcatgtatagctagaatg
aaaagaagttttggaataactatgattatagatgtgcttagaggatctaaaaacaaaaaa
gtattacaatttggatttgatgaattatctacttacggaataatgaaacattactcatcg
aatgatttaaaaacttttataaatacacttatatctcatggttttatagattctatagat
ggaacttacccaaccataaaattaaatgaaaactcaatgaaaaccctaaagggagatatt
aaggtagaatttaaagaaagcaaagtatctaaaaacttagaaatatcaaatgaactatat
gatacactaaagcaaattagatataatatatcaaaagaagaaaatatagctccttatatg
atatttggagatggaactttaaaagttatgtctagtaaatatcctataacaaaagaaagt
atgctaaaaattccaggtgtcggaaatataaaatatgagaaatatggagaaacatttaaa
agtgcaataatcaaatatgttgaagaaaataatataaaaatacagggtgactttataagc
tcacaagatgaaaaacttaactttatagatattaaaacagataaagaactttatgaaaaa
ttatatataaaaagaagtgaacttgctaaaaatgaaggtgtattgccaactatgataata
tctaaaaattcattaaaagaaattagtggaaggtatccatcaaatgaagagcaactaaat
gatataagtgggtttggtcctgtaaaagtaaaaaaatatggacatgtatttttagacatc
gttaataggtacacagaagaaaataatatatctgaaatttggaaagaaaaaaacagattg
aaagttataatagatggagatagtagaactaatgaagaaatagcattagatatgctaaga
gaaagtaaagcattggaatacatatccaatgaaatagaggtctctatttctactatatta
ggttatgtaacagatatgataaagaatggatctgaaatagatttcaaggtaaatttagaa
aaatattatactgaagaagatgaagaacatatattaagaatatgtgaagaagaaggaata
gacaagattagtcttataaagaaaaaattgcctgacaatataaaatatgaatctataaga
gctgtaatattaaaaaaatattataatcttatgtaa
DBGET
integrated database retrieval system
