Paraclostridium bifermentans: KXZ80_13545
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Entry
KXZ80_13545 CDS
T07479
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif00260
Glycine, serine and threonine metabolism
pbif00460
Cyanoamino acid metabolism
pbif00630
Glyoxylate and dicarboxylate metabolism
pbif00670
One carbon pool by folate
pbif00680
Methane metabolism
pbif01100
Metabolic pathways
pbif01110
Biosynthesis of secondary metabolites
pbif01120
Microbial metabolism in diverse environments
pbif01200
Carbon metabolism
pbif01230
Biosynthesis of amino acids
pbif01240
Biosynthesis of cofactors
pbif04981
Folate transport and metabolism
Module
pbif_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KXZ80_13545
09102 Energy metabolism
00680 Methane metabolism
KXZ80_13545
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KXZ80_13545
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KXZ80_13545
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KXZ80_13545
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KXZ80_13545
Enzymes [BR:
pbif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KXZ80_13545
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UAG17784
LinkDB
All DBs
Position
complement(2805657..2806901)
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AA seq
414 aa
AA seq
DB search
MFENLKKVDKEIYESMQRELGRQQRNIELIASENIVSMAVMETMGSHLTNKYAEGYPEKR
YYGGCEHIDEVEKLAIERLKKIFGAEHANVQPHSGANANMGVYFSILKPGDKVMGMNLSQ
GGHLTHGSPANISGQYFEFTEYGVNLKDGRIDYDDIRTKAHEIKPTLIVAGASAYPREID
FKKFKEIADEVGAMLMVDMAHIAGLVAAGLHQNPCEVADFVTTTTHKTLRGPRGGVILCK
EKYAKSIDKAIFPGTQGGPLEHVIASKAVAFKEALDPEFKEYQSQVVKNAKKLAEELMNR
GFELVTGGTDNHLILLDLTNKNITGKEAEKRLDEAYITANKNTIPFDPNGAFVTSGIRLG
TPAVTTRGMKEEDMKDIAEAIDLCLTYNKEEEAREKVVALTNKYPLYNEYKIFE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaaagaaggttgataaagaaatttatgaaagtatgcaacgagaatta
ggaagacaacaaagaaacatagaattgatagcatcagaaaatatagtatctatggcggtt
atggaaactatgggaagtcatttaactaataaatatgcagaaggttatccagaaaaaaga
tattatggagggtgcgagcatatagatgaagtggaaaaattagctattgaaagattgaaa
aaaatatttggagcagaacatgctaatgttcaacctcattctggtgctaatgcaaacatg
ggtgtttatttctcaattttaaaacctggagataaagttatgggaatgaatttatctcaa
gggggtcatttaactcatgggtctcctgcgaatatatcaggacaatactttgaatttaca
gagtacggtgtaaatcttaaagatggaaggatagattatgatgatataagaacgaaggca
cacgaaataaagcctacgttaatagtagcaggagctagtgcatatcctagagaaatagat
tttaaaaagtttaaagaaatagcagatgaagtaggggctatgcttatggtagatatggct
catatagctgggcttgtagcagccggacttcatcaaaatccatgtgaggttgcagatttt
gtaactactactacacataaaactttaagaggacctagaggaggagttattctttgtaaa
gaaaaatatgcaaaatctatagataaagctattttcccaggaactcaaggtggtccatta
gaacatgtaatagcttctaaagctgtagcgtttaaagaagctttagatcctgagtttaaa
gaatatcaatctcaagttgtaaaaaatgctaagaaactagcggaagaattaatgaataga
ggatttgagttagtaacaggtggaactgataatcatctaattttactagacttaactaat
aaaaatataactggaaaagaagctgaaaaaagattagatgaagcatatataacagctaat
aaaaatacaataccttttgatccaaatggagcttttgttactagtggtataagattggga
actccagctgtaacaacaagagggatgaaagaagaagatatgaaagatatagcagaggct
atagacttatgtttaacttataataaagaagaagaagctagagaaaaagtagtagcttta
acaaataaatatcctttatataatgaatataaaatatttgaatag
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