Paraclostridium bifermentans: KXZ80_13605
Help
Entry
KXZ80_13605 CDS
T07479
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03410
Base excision repair
pbif03430
Mismatch repair
pbif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KXZ80_13605 (recJ)
03430 Mismatch repair
KXZ80_13605 (recJ)
03440 Homologous recombination
KXZ80_13605 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_13605 (recJ)
DNA repair and recombination proteins [BR:
pbif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KXZ80_13605 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KXZ80_13605 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KXZ80_13605 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
UAG17795
LinkDB
All DBs
Position
complement(2817905..2820349)
Genome browser
AA seq
814 aa
AA seq
DB search
MFNKKWTLKYKGSIKEYDLGKKMKISPEIGQILKNRGVKDKEDAEIFINPSLDYLRDPFL
MKDMKKAVDRIKDAIENNQNIWVYGDYDVDGVSSTSILCIYFDSIGYPVKYYIPNRLEEG
YGINEDAIRVLKEQECDLIISVDCGITSVKEVELANELGIDIIITDHHEVQDKIPDAYAV
INPKQKDCNYPFDMLCGCGVAFKIIQALTPEDEFKASMYNYLEIVTLATICDIVPLVDEN
RIIVKNGLRLMKDGKNIGLRELINVCGIETDKIGSSHIGFSIGPRINASGRLGYSYLGVE
LFTTKSKEEAMEIASLLEEKNNERQMIEAKMYQEAEGIILNDKSYNSDKVLVIAKEGWQH
GVIGIVASKLTEKYYKPTILLTIEDGEATGSARSIKGFSIFDNLVNCSELLNKFGGHEQA
AGLSMDSKKIETLRRKVNEIANYQLTEDDMVENISVEFELNEGSIDFNLIEELHSLEPFG
MSNPSPRFIMRELEIRGIFRLGKDKNHLKLNLEKNNVYECIGFNMAYMSEQFEIGDKVDV
LFQLDENNYMGNRKIQFLLKDIRMAYPKDIGKNLDSINLFRNIKPCLDSNNKISNYGKVN
IDGCKHINVFDYINEKSLVIANSVNGFFKALSDISLTEYEFDINYNIIENINNKVQLIFF
PYIDKIDLKRYNNIILYDYLYDIEEYSCLFEESDNECEIIKYYDKNDLIYINNIIRSIIP
EREEFITLYKIMSKYKEIKINILDIKSKLNIAPIKLFAMLNVFKELDLINFHVEDENSTL
TMEIMPKPSTKIDLASSKVLQGLNQLKDKYKQSY
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaaaaatggacacttaagtacaaaggtagcataaaagaatatgatttaggt
aaaaaaatgaagatttccccggaaatagggcaaattttaaaaaatagaggtgttaaagat
aaagaagatgctgaaatttttataaatccgtcattagattacttaagagacccattttta
atgaaagatatgaaaaaagctgtagatagaataaaagatgctatagaaaacaatcaaaat
atatgggtatatggagattacgacgttgatggagtatcatctacatctatattatgtata
tatttcgactctataggatacccagttaaatactatataccaaatagattagaagaagga
tatggtataaatgaagatgcaataagagtattgaaggaacaagagtgcgatttaataata
agtgtagattgtggaataacatctgtaaaagaagttgaattggcgaatgagttgggtata
gatattataataacagatcaccatgaggtacaagataaaataccagatgcgtatgcagtt
ataaatcctaagcaaaaagattgtaactatccatttgacatgttatgtggttgtggagta
gcattcaaaattatacaagcattaacgcctgaagacgagtttaaagcttctatgtacaac
tacttagaaatagtaactttagcgactatctgtgatatagtgcctttagtagatgaaaat
agaataattgtgaaaaatggcttaaggcttatgaaagatgggaaaaatataggtctaaga
gaacttataaatgtttgtggaattgaaactgataaaataggatcatcgcatataggattt
tctataggtcctagaattaatgcttctggtagattagggtattcatatttaggtgttgaa
ttatttacaactaaatcaaaagaagaagctatggaaatagctagtctcttagaagaaaag
aataatgaacgacaaatgatagaagctaaaatgtatcaagaagcagaaggtataatttta
aatgacaaaagctataattcagataaagtactagtaatagcaaaagaaggatggcaacat
ggggttataggtatagttgcatctaaattgacagaaaagtattataagccaacaatactt
ttaactattgaagatggagaagctactgggtctgctagatctataaaagggttcagtata
tttgataatttagttaattgttcagaattactaaataaatttggtggacatgaacaagca
gcaggactatccatggattctaaaaaaatagaaaccttaagaagaaaagttaatgaaatt
gcaaactatcagcttacagaagatgatatggtagaaaatatatctgtagagtttgaatta
aatgaaggttctatagattttaatttaatagaagaacttcatagtttagagccttttgga
atgagtaatccaagtcctagatttataatgagggaattagaaataagaggtatttttagg
ctaggaaaagataaaaatcacttaaaattaaacttagaaaaaaataacgtatatgaatgt
ataggatttaacatggcatatatgtctgagcaatttgagataggggataaagttgatgta
ttattccaattagatgaaaataactacatgggaaatagaaaaatacaatttttactaaaa
gatataagaatggcatatccaaaggatattggcaaaaacttagatagtataaatctattt
agaaatattaaaccttgtttagattcaaataataaaatttcaaattatggaaaagttaat
atagatggatgcaaacatataaatgtatttgactatataaatgaaaaaagtttagtaatt
gcaaattcagtaaatggattttttaaagcattatcagatatatcacttactgaatatgaa
tttgacataaattacaatattatagagaatataaacaacaaagttcaacttatattcttt
ccttatattgataaaatagatttaaaaagatataataatattattctttatgattattta
tatgatattgaggaatattcatgtctatttgaagaaagtgacaatgaatgtgaaattata
aaatattatgataagaatgatttaatatatataaataatattattagaagtataattcca
gagagagaagaatttataactttatataaaataatgtctaaatataaagaaataaaaatt
aatatactagacattaaatctaagttaaacatagcaccaataaaattatttgctatgtta
aatgtgtttaaagaattagatttaattaattttcatgtggaagatgaaaatagtacttta
acaatggaaattatgccaaaaccaagtactaagattgatttagcttcaagtaaagtacta
caaggacttaatcaacttaaggataaatacaagcaaagctattag
DBGET
integrated database retrieval system
