Paraclostridium bifermentans: KXZ80_14000
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Entry
KXZ80_14000 CDS
T07479
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KXZ80_14000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbif03400
]
KXZ80_14000
DNA repair and recombination proteins [BR:
pbif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KXZ80_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ATP-synt_B
TPR_Trm732_C
DUF6271
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
UAG17868
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Position
complement(2896731..2899109)
Genome browser
AA seq
792 aa
AA seq
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MNKKSLKILEFDKITSLLKEKASSSLGLKYINELVPSSDYEEVKYMLEETSEAQSILIKK
GGINLQGLHDVEDKVKRAKVGASIDPGSLLMIADTLRVARLLNNNLSSSEEEDFNYPIIQ
ALSSGLYTYREVEEKIYNAIVSEVEISDSASSELRSLRRKIIQKNQSIRSKLNGIISSST
YQKYLQDAIISIRGDRFVVPVKAEYRSQVSGIVHDQSSSGATLFIEPMSIVEMNNELRQF
RLKEKEEIERILSELSAMVGDISDDILSNQEILGKIDFAFAKGKLSLALKGIEPKLNKEN
YINIKNGRHPLLDRKSVVGNDIRLGEEFHTLVITGPNTGGKTVTIKTVGLFALMVQSGLH
IPADYGTSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILNEVTENSLVIFDELGAG
TDPVEGAGLAIAILEDVNMAGAKCIATTHYSEIKHYALTKDGVENAAVEFDLENLRPTYR
LFIGVPGKSNAFAISKRLGLSDYVINRAKEFIDTDTIAVEDVIHSLEKSRVEAVEEREEA
ARLRKEIQELKEEYESKLDKIAAQRERLLEEARQEAFRITRQAKEETEAVIKELRRLEQE
SMSKDKNRKIEELRKEISNSMGALQPSVKSMIVPKTSSKEIKELNPGDEVKVITLNQQGS
VVTVDNNKKEAVVQIGIMKMNLPFKSLEKAKKDPKSTVTKATRNVIKSKSGRVKNDVDLR
GMTLEEAREEVDKYLDDACLAGLEKVTVIHGIGTGVLKSGITEMLKKHKHVKSQRPGQYG
EGGMGVTIVTLK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaatcgttgaaaattttagagtttgataagataacatcattattaaaagaa
aaagcttcgtcttctttagggttaaaatacatcaatgaattagtacctagttcagactat
gaagaagtcaaatatatgctagaagaaactagcgaagctcaatcgatacttataaaaaaa
ggtggaataaacctacaaggtctacatgatgtagaagataaagttaaaagagcaaaagtt
ggagcgtctatagatcctggaagtttattaatgatagcagatactttgagggtagcgaga
cttttaaacaacaatttatcttcaagtgaagaagaagatttcaactacccaataatacaa
gcattatcaagtgggctatatacttatagggaagtagaagaaaaaatatacaatgctata
gttagtgaagtagaaatttcagatagtgcttcgagcgagttaagatctttaagaagaaaa
ataatacaaaagaatcaatctatacgttctaaactaaatggaataatcagttcatcaact
tatcaaaagtatttacaagatgcaatcatatcaataagaggagatagatttgtagtacct
gtaaaagctgaatatagaagtcaagtatcaggtatagttcacgatcaatcatcgtcagga
gcaaccttatttatagaacctatgagcatagttgaaatgaacaatgaacttagacaattt
agattaaaagaaaaagaagaaatagaaagaatactaagtgaattatcagctatggttgga
gatataagtgatgatatattaagtaatcaagaaattctaggaaagatagatttcgcattt
gcaaaaggtaaattatcattagcattaaaaggtatagaaccaaagctaaataaagaaaat
tatataaatataaaaaatggaagacatcctttattagatagaaaaagcgtggtaggaaac
gacataagactaggtgaggagttccatacattagttataacaggacctaacacaggaggt
aaaactgttacgattaaaactgtaggactatttgcacttatggtacaaagtgggttacac
atacctgcagactatggaacgagtatgtgcgtttatgacaatgtatttgcagatatagga
gatgagcaaagtatagaacaaagtttatctacattttcatctcatatgactaatatagta
tctatattaaatgaagtaactgaaaactcattggtaatatttgatgagttaggagctgga
acagaccctgttgaaggagctggacttgctatagctatacttgaagatgtaaatatggca
ggagctaaatgtatagctactactcactatagtgagataaagcactatgcacttactaaa
gatggagtagaaaatgcagcagtagaatttgatttagaaaacttaagaccaacatataga
ttatttattggagttccaggaaaatctaatgcatttgcaatatctaaaagattaggatta
agtgattatgtaattaatagagctaaagaatttatagatacagacactatagctgttgaa
gatgtaattcatagcttagaaaaatcaagagtagaagctgtagaagaaagagaagaagct
gctagattaagaaaagaaattcaagaactaaaagaagaatatgaatctaagttagataaa
atagcagctcaaagagagagattattagaagaagctagacaagaagcctttagaattacg
agacaagctaaagaagaaacagaagccgttataaaagaacttagaagattagaacaagaa
agtatgtctaaagataaaaatagaaaaattgaagaattaagaaaagaaatttcaaattct
atgggagcattacagccaagtgtaaaaagcatgatagttccaaaaacatcttcaaaggaa
ataaaggaattaaatcctggagatgaagttaaagtaataactttaaatcaacaaggatct
gtagttacagtagataataataaaaaggaagctgtagtacaaattggaataatgaaaatg
aacctaccgtttaaatctttagaaaaagctaaaaaagatccgaaatctacagttacaaaa
gctactagaaatgttataaaatctaaatctggaagagtaaaaaatgatgtggatttaaga
ggtatgactttagaagaagctagagaagaagtagataaataccttgatgatgcatgttta
gcaggtcttgaaaaagtaacagttatacatggtataggaacaggagtattaaaaagtgga
ataactgaaatgttaaaaaaacataaacatgtaaaatctcaaagaccaggacaatatggt
gaaggtggaatgggagttacaatagtaactttaaaataa
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