Paraclostridium bifermentans: KXZ80_15360
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Entry
KXZ80_15360 CDS
T07479
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KXZ80_15360 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbif01007
]
KXZ80_15360 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbif03016
]
KXZ80_15360 (lysS)
Enzymes [BR:
pbif01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KXZ80_15360 (lysS)
Amino acid related enzymes [BR:
pbif01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KXZ80_15360 (lysS)
Transfer RNA biogenesis [BR:
pbif03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KXZ80_15360 (lysS)
Prokaryotic type
Other AARSs
KXZ80_15360 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Rho_N
Motif
Other DBs
NCBI-ProteinID:
UAG18085
LinkDB
All DBs
Position
complement(3172579..3174105)
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AA seq
508 aa
AA seq
DB search
MNNDQQNVNDQAKEELTEVLKVRREKLAKLQEMGRNPFHISRYDRTNCSTDIKNDFETFE
GKVVKLAGRIMSKRIQGKAGFIDIQDQEGRIQCYVRLDRIGEEEYAVFSTYDIGDIIGIE
GEVFKTKKEEISIKANDVKLLTKSLQVLPEKYHGLKDQDLRYRQRYVDLIVNPEVKDAFV
TRTKAMKALRSYLDERGFLEVETPILNTIAGGANARPFITHHNTLDIPMYLRIANELYLK
RLIVGGFDKVYEMGRMFRNEGMSIKHNPEYTAIELYQAYADYTDMMEIAENVIAHMAEAA
TGSMKIDYQGTEIDFTPPWRRMTMEECVKEYAGVDFATIDTDEEALEVAKEKGIEITPGM
RRGEVINALFEEFGEDKLIQPTFITHHPVEVSPLAKRNVEDPRRTDRFEAFANKWELANA
FSELNDPIDQKGRFMDQLRKKELGDDEACDMDEDFVNALEVGLPPTGGLGIGIDRVIMLL
TNAPSIRDVILFPTMKPIKENSADEIEE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgatcaacaaaacgttaatgatcaagctaaagaagaacttacagaagtgctt
aaagtaagaagagaaaaattagctaaattacaagagatgggaagaaatccattccatata
agtagatatgatagaactaactgttctacagatataaagaatgactttgaaacttttgaa
ggtaaggttgttaaactagctggacgtataatgagtaagagaatacaaggtaaagctgga
tttatagacatacaagatcaagaaggaagaatacagtgttatgtaagattagatagaata
ggtgaagaagaatatgctgtgttctctacatatgatataggtgacataataggtatcgaa
ggagaagtatttaaaactaagaaagaagagatatctataaaagctaatgatgtaaaatta
ttaactaagtctcttcaagttcttccagaaaaataccatggattaaaagatcaagattta
agatacagacaaagatatgttgatttaatagttaacccagaagttaaagatgctttcgtt
acaagaactaaagctatgaaagctttaagatcttatttagatgaaagaggattcttagaa
gttgagactcctatattaaatactatagctggtggagcgaatgctagaccatttataact
catcataacacattagatataccaatgtatttaagaatagctaacgaattatacttaaag
agacttatagttggtgggtttgataaggtgtatgaaatgggaagaatgtttagaaatgaa
ggtatgtcaattaaacataaccctgagtatactgctatagaattataccaagcatatgca
gattatacagatatgatggaaatagctgaaaatgtaatagctcatatggctgaagctgca
actggaagcatgaaaatagattatcaaggaacagaaatagactttacacctccatggaga
agaatgactatggaagaatgtgtaaaagagtatgctggagtagacttcgctactatagat
actgatgaagaagcattagaagtagctaaagaaaaaggtatagaaataactcctggtatg
agaagaggagaagttatcaacgctttattcgaagaatttggtgaagataagttaattcaa
cctacatttataactcatcatccagtagaagtttctccacttgctaagagaaacgtagag
gatccgagaagaacagatagatttgaagctttcgctaataagtgggagttagcaaatgct
ttctctgaacttaatgaccctatagatcaaaaaggaagatttatggatcaattaagaaag
aaagaattaggtgacgatgaagcttgtgatatggacgaagattttgtaaatgcactagaa
gtagggctacctccaacaggtgggctaggaataggaatagatagagttattatgttatta
acaaacgctccatctataagagacgttatattattccctacaatgaaacctataaaagaa
aactctgcagatgaaatagaagagtaa
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