Paraclostridium bifermentans: KXZ80_15540
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Entry
KXZ80_15540 CDS
T07479
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif00220
Arginine biosynthesis
pbif00240
Pyrimidine metabolism
pbif00250
Alanine, aspartate and glutamate metabolism
pbif01100
Metabolic pathways
pbif01110
Biosynthesis of secondary metabolites
pbif01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KXZ80_15540 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KXZ80_15540 (carB)
00220 Arginine biosynthesis
KXZ80_15540 (carB)
Enzymes [BR:
pbif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KXZ80_15540 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_4
RimK
LUD_dom
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UAG18118
LinkDB
All DBs
Position
complement(3205153..3208359)
Genome browser
AA seq
1068 aa
AA seq
DB search
MPKIDNIKKTLVLGSGPIIIGQAAEFDYSGTQACQALKEEGIEVVLINSNPATIMTDAEV
ADKIYIEPLTIEFIEKIIEKERPDSILAGMGGQTGLNLAVELHDAGILDKYNVRVLGTSI
DSIKKGEDRDLFREVMKEINQPVVISDIVTNLEDGLAFAEKIGYPVVVRPAYTLAGTGGG
IADNEEELTEILSQGLQLSPVSQVLIEKSIKGWKEIEYEVMRDSNGNCITVCNMENIDPV
GVHTGDSIVVAPSQTLSDKEYQMLRKASIDIINAIEVQGGCNVQIALNPHSLEYAIIEIN
PRVSRSSALASKATGYPIAKVAAKIALGYTLDEIQNAVTKKTYACFEPTLDYVVVKIPKW
PFDKFKQANRKLGTKMMATGEIMSIGSNFEAAILKGIRSLEIGKYSLVHKASEDRSIEEL
KARVVVPDDERLFDLAEMIRRGYKLEMIEQITGVDKWFINKFKWIVEQEEKLRGMHIEDL
NKEYLLELKKKGFSDKGIADLMKISPAKVYELRSLYNINPSYKMVDTCGGEFDALSPYYY
STYEQYDEVVVSDKKKVIVLGSGPIRIGQGIEFDYCSVHCVKSLRAQGIETIIVNNNPET
VSTDFDTSDKLYFEPLTEEEVLNIIEKENPDGVILQFGGQTAIKLAKFLDEKEIKILGTS
CKDIDAAEDREKFDELLEKLDINRPKGKAIWSVNEGIEEAKKLGYPVLVRPSYVLGGQGM
EITYDENKLAQYLKDAFLRDTKNPVLIDKYLTGREIEVDAICDGEDILIPGIMEHLERAG
VHSGDSITMYPSQNISDEIKAKILDYTKKIALELNVLGMVNIQFIEFHGELYIIEVNPRA
SRTVPYISKVSKVPIVDLATKCMLGYKLKDLGYGTGVYKEPKLISVKVPVFSMSKLAKVD
VSLGPEMKSTGEVLGVGETLEEALYKGFLGAGKKMSNKRGVVLATINNYDKDEFIEIAKD
MNDLGYTFVATEGTAESLRENGIEATIVNRVEEARPNILDVIRNKQVDIVINTPTKGNDS
TRDGFKIRRTATEFSTEVMTSLDTLKALVEVKKKEINRDGLAVYNIAD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaatagataatataaaaaagacattagtactaggttcaggaccgataataata
ggacaagcagctgagtttgactattcaggaacacaagcttgccaagcgttaaaagaagag
ggaatagaagttgttttaataaatagtaacccagctacaataatgactgatgcagaagta
gcggataagatatatatagaaccattaacaatagaatttatagaaaaaataatagaaaaa
gaaagaccagatagtatattagcaggaatgggaggtcaaacaggacttaacttagctgtt
gaacttcatgatgcaggaatacttgataaatataatgtaagagttttaggaacttctata
gattctataaaaaaaggtgaagacagagatttatttagagaagtaatgaaagaaataaac
caaccagtagttattagtgatatagtaactaacttagaagatggattagcatttgcagag
aaaataggatatccagtagtagttagacctgcatacactctagcaggaactggaggaggt
atagctgataacgaggaagagctaacagaaatactttctcaaggattacagttaagccca
gtaagccaagtactaattgaaaaaagtataaaaggttggaaagaaatagagtatgaagta
atgagagactctaatggtaactgtataacagtatgtaatatggaaaatatagatccagtt
ggagttcatacaggagacagtatagtagtagccccgagtcaaactttaagtgataaagaa
tatcaaatgcttagaaaagcatcaatagatataataaatgctatagaagttcaaggtgga
tgtaatgttcaaatagctttaaatcctcatagtttagagtatgcaataatagaaataaac
ccaagagtaagtagatcttctgcacttgcatcaaaggctacaggatatccaatagctaag
gttgcagctaaaattgcattaggatatacattagatgaaatacaaaatgctgttactaaa
aagacttatgcatgttttgaacctacattagattatgtagttgtaaaaatacctaaatgg
ccatttgataaattcaagcaagctaatagaaagctaggaacaaagatgatggctacagga
gaaataatgagtataggaagtaactttgaagcagctatacttaaaggaataagatctctt
gaaataggaaaatattcattagttcataaggcatctgaagatagaagcatagaagaacta
aaagcaagagtagtagttcctgatgatgaaagactatttgacttagctgaaatgataaga
agaggctataagctagagatgatagaacaaatcactggagttgacaagtggtttataaat
aaatttaagtggatagtagagcaagaagaaaagttaagaggaatgcatattgaagattta
aataaagaatatttactagagttaaagaaaaaaggattctcagataaagggatagctgat
ttaatgaaaataagtccagctaaagtttatgaattaagaagcttatataatataaatcca
tcatataaaatggttgatacttgcggaggagaattcgatgctttatctccatattactac
tcaacttatgaacaatacgatgaggtagtagtaagtgataagaaaaaagtaatagtttta
ggatctggaccaataagaataggtcaaggtatagaatttgattattgctcagttcactgt
gtaaaatctctaagagcacaaggaatagaaactataatagtaaacaacaatccagaaaca
gtaagtacagacttcgatacttctgataaattatactttgaaccactaacagaagaagaa
gttttaaatataatagaaaaagaaaatccagatggagtgatacttcaatttggaggacag
acagctataaaattagctaaattcctagatgaaaaggaaataaagatattaggaactagt
tgcaaggatatagatgcagctgaagatagagagaagtttgatgagttattagaaaaacta
gatataaatagaccgaaaggtaaagctatatggtcagtaaacgaaggtatcgaagaagct
aaaaagttaggatatccagtacttgttagaccttcatatgttctaggtggtcaaggaatg
gaaataacttatgatgaaaataagttagctcaatatttaaaagatgcatttttaagagat
actaaaaatcctgtacttatagataaatacttaactggtagagaaatagaagtagacgct
atatgtgatggagaagatatattaataccagggataatggaacatttagaaagagctggg
gttcactctggagatagtataacaatgtatcctagtcaaaatataagtgatgaaataaaa
gcaaaaatattagattacactaaaaaaattgcattagagttaaacgtattaggaatggtt
aatatacagtttatagagttccatggagaactatatataatagaggttaacccaagagca
agtagaacagttccatatataagtaaggttagtaaggtgcctatagtagatttagctacg
aaatgcatgctaggatataagttaaaagatttaggatatggaacaggagtttataaagaa
cctaagttaatatctgtaaaagttccagtattctcaatgtcaaagcttgctaaggtagat
gtaagcttagggcctgaaatgaaatctacaggagaagttttaggagtaggagaaacttta
gaagaagctttatacaaaggattcttaggtgctggtaaaaagatgtctaataaaagaggt
gttgttttagcaactataaataactatgataaagatgagtttatagaaatagctaaagac
atgaatgacttaggatatacatttgtagcaacagaaggaacggctgaatctttaagagaa
aatggaatagaagctacaatagtaaatagagtagaagaagctagacctaacatattagat
gttataagaaacaagcaagtagatatagtaataaatacacctactaaaggaaatgattca
actagagatgggttcaagataagaagaacagctacggagttttcaacagaagtaatgact
tcgttagatacattaaaagctttagtagaagttaagaaaaaagaaataaatagagatggt
ttagcagtttacaatatagcagattaa
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