Prevotella bivia: QP022_00625
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Entry
QP022_00625 CDS
T09089
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbiv
Prevotella bivia
Pathway
pbiv03410
Base excision repair
pbiv03430
Mismatch repair
pbiv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QP022_00625 (recJ)
03430 Mismatch repair
QP022_00625 (recJ)
03440 Homologous recombination
QP022_00625 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiv03400
]
QP022_00625 (recJ)
DNA repair and recombination proteins [BR:
pbiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QP022_00625 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QP022_00625 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QP022_00625 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Chitin_synth_1
Motif
Other DBs
NCBI-ProteinID:
WIL17825
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Position
1:134682..136406
Genome browser
AA seq
574 aa
AA seq
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MHFTWKHISPTQQEESAAKELGEKLSISPILALILIRRGITTESAAKRFFRPQLADLINP
FLMKDMDAAVDRLNDAMGRKERILVYGDYDVDGCTSVALVYKFLRQYYSNIDYYIPDRYE
EGYGVSKKGIDFAKETSVKLIIILDCGIKAIEEITYAKEQGIDFIICDHHVPDEIMPPAV
AILNPKRKDDSYPFKHLCGCGVGFKFMQAFAKNNNIPFSRLVPLLDFCAVSIAADLVPVV
DENRILAYHGLKQLNQNPSLGLKAIIDICGLSERELEMSDIIFKIGPRINASGRMETGKE
SVDLLVERDFAEAVKAAKHIDEYNEQRKGVDRQMTEEANNIVERLENQKHQSSIVLYDEH
WKKGVVGIVASRLTEIYFRPTIVLTKDGEYATGSARSVAGFDIYEAIKSCRDLLINFGGH
TYAAGLTLKWADVKTFRERLQAFIDNHIQPHQQEPILNIDAIIDFKDITKKLHNDLKRFA
PFGPSNPKPIFSTEGVYDFGTSKVVGREQEHIKLELVDSKSNNVMNGIAFGQSASARYIK
SKRSFDIAFTIEENVFKRNLVQLQIEDIRRTESE
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcactttacgtggaaacatatatcaccaactcagcaagaagagagtgctgctaaggaa
ttaggagagaagttgagcattagccctatactcgcccttattctaataaggcgtggcatc
actacagaaagtgcagctaaacgcttctttcgtccgcagttagccgacttaattaatccg
tttctaatgaaggatatggatgctgccgtcgatcgtttgaatgatgctatggggcgtaaa
gaacgtattcttgtttatggcgattatgatgtagatggatgtacatcggtagcattggtt
tataaattcttgcgtcaatattattcaaatattgattattatattccagatcgctatgaa
gaaggctatggagtaagcaaaaaaggtattgattttgctaaagaaacaagtgtaaagcta
atcattattctcgactgtggcatcaaagctatagaagagattacttatgcaaaggagcaa
ggcatcgactttattatctgcgatcaccacgtacctgacgaaataatgcctccagctgta
gctattcttaaccctaaacgcaaagatgatagttatccttttaagcatctttgtggttgt
ggtgtgggcttcaagtttatgcaagcttttgcaaagaataataatattccgttttctagg
cttgttcccctactcgacttttgtgctgtaagcatagcagccgacttagttcctgttgta
gatgaaaaccgaattttagcctatcatgggttaaaacaattgaatcaaaaccctagtctc
ggcttgaaagctattattgatatttgtgggctatcagaacgtgaactagagatgagcgac
attatttttaagataggacctcgtatcaatgctagtggacgtatggaaacaggcaaagag
agtgtagatcttcttgtagaacgcgactttgctgaagctgtaaaagcagctaaacacatt
gacgaatataacgaacagcgtaagggcgtggatcgtcagatgacagaagaagcaaacaat
attgtagagcgcttggaaaaccagaaacatcaatcgagtattgtactgtatgatgagcat
tggaaaaaaggtgtggtaggtattgtagcttcacgattaactgaaatctattttcgccca
actattgtccttactaaagatggagagtatgctacaggatcagctcgtagtgtggcaggt
tttgatatctacgaggctataaaaagctgtcgagacctattaatcaattttggaggtcat
acttatgctgcaggcttaacccttaaatgggctgatgtaaaaactttccgtgaacgatta
caagcctttattgacaaccatattcagccacatcagcaagaaccaattcttaatattgat
gccattattgattttaaggacattactaagaaattgcataacgatttaaagcgctttgct
ccctttggtcctagcaatcctaaaccaatattctcgacagaaggtgtatacgattttggt
actagcaaagtggtgggtagagagcaagaacatattaaattagagcttgttgactcgaaa
tcaaacaacgtaatgaatggtattgccttcggacaaagtgcctctgcaagatatattaaa
tcgaagcgatcgtttgacatcgcatttactattgaggagaatgtgttcaaacgcaatcta
gtgcaattacaaatagaagatattcgacgtaccgagagtgaatag
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