Prevotella bivia: QP022_02805
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Entry
QP022_02805 CDS
T09089
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbiv
Prevotella bivia
Pathway
pbiv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QP022_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbiv03019
]
QP022_02805
03016 Transfer RNA biogenesis [BR:
pbiv03016
]
QP022_02805
Enzymes [BR:
pbiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QP022_02805
Messenger RNA biogenesis [BR:
pbiv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QP022_02805
Transfer RNA biogenesis [BR:
pbiv03016
]
Prokaryotic type
tRNA degradation factors
QP022_02805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
ORF6C
HxsD
HutF_N
Motif
Other DBs
NCBI-ProteinID:
WIL17222
LinkDB
All DBs
Position
1:complement(637387..639660)
Genome browser
AA seq
757 aa
AA seq
DB search
MNVITKTIQLADGRTISIETGKVAKQADGAAMLRMGNTVLLATVCAAKEAVPGTDFMPLQ
VDYREQYSAAGRFPGGFTKREGKANDDEILTSRLVDRVLRPLFPADYHTEVYVQVMLLSA
DGVDQPDALAGFAASAALAASDIPIEYPISEVRVARINGEYVINPTFPQMKEADMDIMVG
ATKDNIMMVEGEMDEVSELDLIGALKAAHEAIKPMCELQEELSKECGTDVKREYCDEVND
EELREQVRKETYDACYAQAQSGDNDKHHREEVYAQIKADFVEKFDAAHAELTADELAEKH
EMIDRYYADVERDTMRRSVLDTGKRMDGRATDEIRHIWSEVDTLPMPHGSALFQRGETMS
LSTCTLGTKMDEKMVDNVLEKSYQRFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRA
LKNQIPTDFPYTVRLVSQILESNGSSSMATVCAGTLALLDAGVPMKKPVSGIAMGLIKNP
GEDKYAILSDILGDEDHLGDMDFKTTGTKDGITATQMDIKCDGLSYEILEKALMQAKAGR
EHILGKMMETMSEPREEMKPQVPRIEQMFIPKEFIGAIIGPGGKIIQQMQEDTGATITIE
EIENQGKIQVSAPNKESIDAALGKIKAIVAVPEIGEIYEGTVRSIMPYGCFVEILPGKDG
LLHISEIDWKRLETVEEAGIKEGDKIQVKLLEIDQKTGKYKLSRKVLLEKPEGYVEPQRR
PRPDRGDRNDRRPRRDGEYRGDDRRPRREENQNETND
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacgaaaacaattcaattggctgatggtagaaccatctcaattgaaact
ggaaaggttgcaaagcaagctgatggtgcagccatgttgcgcatgggtaacaccgtatta
ttggctactgtttgtgcagctaaagaggcagttccaggtacagatttcatgcctttgcaa
gtagattatcgtgagcagtattctgcagcaggccgtttccctggtggttttaccaagaga
gaaggcaaggcaaatgacgatgaaatcttaacttcacgcttggtggatcgtgttcttcgt
ccacttttcccagccgattatcacacagaagtgtatgtacaggtaatgttgctatctgct
gatggcgttgatcagcctgatgctttagctggtttcgcagcttctgctgctcttgcagct
tctgatattcctatcgaatatcctatttctgaggttcgtgtggcacgcattaatggcgaa
tatgtcatcaatccaaccttcccacagatgaaggaagctgatatggacatcatggtaggc
gcaacaaaggataacatcatgatggtagaaggtgaaatggatgaggtttcagagctagat
cttatcggcgctttgaaagctgctcacgaggcaattaagcctatgtgtgagcttcaggaa
gaactttctaaggaatgtggtactgatgttaagcgtgaatactgcgatgaagtaaacgat
gaagagcttcgtgagcaggttcgtaaagaaacatacgatgcttgttatgcacaagcacaa
agcggtgataacgacaagcaccaccgtgaagaagtatatgcacagattaaggcagacttc
gttgagaagtttgatgctgctcatgccgagcttacagcagacgagttagcagagaaacac
gagatgatcgatcgctattatgctgatgtagaacgcgacactatgcgtcgtagcgttttg
gatacaggtaagcgtatggatggtcgtgctactgatgagatacgtcatatttggtcagaa
gtagatactttgccaatgcctcacggtagcgcattgttccaacgtggtgagacaatgtcg
ctttctacatgtactttaggtactaagatggacgagaagatggttgataatgtgcttgaa
aagagctaccaacgcttcttgttacactataatttcccaccattctctacaggtgaagct
aaggcacagcgtggtgttggtcgtcgtgaaattggtcacggacacttggcatggcgtgct
ttgaagaaccaaattcctacagatttcccatacacagttcgtttggtaagtcagatttta
gagtctaacggttcttcatcaatggctactgtatgtgcaggaacattggcattgcttgat
gctggtgtacctatgaagaagccagtatctggtattgcaatgggattgattaagaaccca
ggagaagataagtatgctattctaagcgatatccttggtgatgaggatcacttaggtgat
atggactttaagacaacaggtactaaggacggtattacagctactcagatggatattaag
tgtgatggtttgtcatacgaaatcttagagaaggcgttgatgcaagctaaggctggacgt
gaacatatccttggtaagatgatggaaactatgtctgaaccacgcgaagaaatgaagcca
caagttccaagaattgagcaaatgttcattcctaaggaatttattggtgctatcatcggt
cctggtggtaagatcattcagcagatgcaggaagatactggggcaactatcaccatcgaa
gagattgaaaatcaaggtaagattcaagtttcagcacctaacaaagagtcaatagatgct
gccttaggtaagatcaaagctatcgtagctgttcctgaaataggtgagatttatgaagga
actgttcgctcaattatgccttatggatgctttgtagagatccttccgggtaaagatggc
ttgttgcacatctctgaaatcgactggaaacgtcttgaaactgttgaagaagcaggtatc
aaggaaggcgataagatccaagttaagttgttagaaatcgatcagaaaactggtaaatat
aagctttctcgcaaagtgcttttggagaaaccagagggctatgtagagccacaacgccgt
cctcgcccagatcgtggtgatcgtaacgatcgtcgtccacgtcgtgatggcgagtacaga
ggtgatgatcgtcgtccacgtcgtgaagaaaatcagaatgaaaccaatgattaa
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integrated database retrieval system
