Prevotella bivia: QP022_03475
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Entry
QP022_03475 CDS
T09089
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pbiv
Prevotella bivia
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbiv03036
]
QP022_03475 (xerD)
Chromosome and associated proteins [BR:
pbiv03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
QP022_03475 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Phage_int_SAM_2
Motif
Other DBs
NCBI-ProteinID:
WIL17349
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All DBs
Position
1:800213..801145
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AA seq
310 aa
AA seq
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METNKKSSDNVVRKFRRYLKLEKGHSENTVDAYMHDIEKLSSYLKAEKVDVLDVKLDDLE
HFAASISEIGIGARSLARILSGVRHFYRFLVLDGYLETDPTELLESPKQPQHLPEVLSTA
EVDIILQSIDLSKWEGQRNKAIIEMLFSCGLRVSELTNLKLSNLYLDDLYIRVMGKGSKE
RLVPISPRAIEELNYWFLDRNQMVIKEGEEDYVFLNRRGAHLTRTMILIMLKRYAKGAGI
KKTISPHTLRHSFATALLEGGADLRSIQAMLGHESVVTTEIYTHIDTTTLRQEILNHHPR
NIRYREEHGL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaacaagaaatcatccgacaacgttgtacgcaagtttcgccgttatctgaag
ctcgaaaagggacattccgagaatactgtcgatgcctatatgcacgatattgagaaactt
tcgtcctatcttaaagccgaaaaggtggatgtgttggatgtgaagcttgatgatttggaa
cactttgccgcctctatttctgaaattggtattggcgccaggtcattggcgcgcattcta
agcggggtgcgccacttctatcgctttctggttttagatggctatttagaaaccgatcct
accgaattgctcgagtcgcccaagcagccgcaacatcttcccgaggtgctttccacagcc
gaagtggatattatcctacaaagcattgacctctcaaagtgggaggggcagcgcaataag
gctattatagaaatgcttttctcgtgcgggctgcgtgtgtccgaacttaccaatctgaaa
ctttccaacctatatcttgacgatctgtatatccgtgtgatgggaaaaggctcaaaagaa
cgccttgtccctatctcgccacgtgctatcgaggagctaaactattggtttttagatcgt
aaccaaatggtgataaaggagggagaagaagattatgtattcctaaatcggcgtggcgct
catcttacccgcactatgatccttattatgttaaagcgttatgctaaaggggctggtatt
aaaaagaccatttctccccacacgcttcgccactcttttgccactgctctgcttgaaggg
ggtgccgatcttcgttccattcaagctatgttggggcatgaaagtgtggtaactacagaa
atttatacccatattgacactacaaccctgcgacaagagatcctcaatcatcatccccgt
aatatccgttatcgggaggaacatgggctatag
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