Prevotella bivia: QP022_05425
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Entry
QP022_05425 CDS
T09089
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pbiv
Prevotella bivia
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiv03400
]
QP022_05425 (radA)
DNA repair and recombination proteins [BR:
pbiv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QP022_05425 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA
Lon_C
AAA_22
DnaB_C
DUF7125
AAA_16
AAA_14
GvpD_P-loop
AAA_24
Zn_Ribbon_YjdM
Zn_ribbon_8
NTPase_1
Isochorismatase
nSTAND_NTPase5
nSTAND3
AAA_5
DUF7129
CobU
OPT
Elong_Iki1
TniB
zf-RING_10
DZR
RUBY_RBDX
HypA
Motif
Other DBs
NCBI-ProteinID:
WIL17689
LinkDB
All DBs
Position
1:complement(1246613..1248010)
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AA seq
465 aa
AA seq
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MAKDKIAYVCSNCGHESAKWIGKCPNCGQWNTFKEFRVATDSGTSAAKHAATMLRNGTTG
ARANLTNKPQRLCDISSKDDPRIDMNDSELNRVLGGGMVPGSIILLGGEPGIGKSTLTLQ
TILHLNLSVLYVSGEESPHQIKMRAERITKDIPENVVILSETSLEHIFEHAKDVKPQLLV
IDSIQTIATEDVDSSPGSVTQVRECASALLRFAKTSGIPVILIGHINKEGTIAGPKILEH
IVDTVIQFEGDQHYMYRILRSIKNRFGSTSELGIYEMQQQGLRQVSNPSELLLTGDHEGL
SGVAISSAIEGVRPFLVETQALVSSAAYGTPQRSATGFDGRRLNMLLAVLEKRVGFKIMQ
KDVFLNIAGGLRVTDMAMDLSVIAAVISSNLDIPIEQGWCMCGEVGLSGEVRPVNRIEQR
IAEAEKLGFKDIIIPKYNTQGLTGKYTIKIHPVRKVEEAIRELFG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggacaaaatagcgtatgtttgcagcaattgcggacatgaaagtgcaaaatgg
ataggtaaatgtcctaattgtggacaatggaacacctttaaagagtttagggtagcaaca
gatagtggtacttcggctgctaaacatgctgccacaatgctacgaaatggtactacaggg
gcaagagctaaccttactaacaaacctcaacgattgtgcgatatttcctcaaaagacgat
cctcgcattgatatgaacgatagcgagctcaatcgtgttttgggtggaggtatggtgcct
ggtagtattatcttgttgggtggagagccgggtataggtaagagtacgcttaccttgcaa
accattcttcacctcaacctaagtgttctctatgtgagtggagaagaaagtccacatcaa
ataaagatgcgtgccgaacgcattacaaaagatattcctgaaaatgtggtaatcctttca
gaaacatcgctcgaacatatctttgaacatgctaaagatgtaaagccccaactattggta
atcgactctatacaaactattgccacagaagatgttgatagtagtcctggaagcgttaca
caggtgcgcgagtgtgcttctgccctcctccgctttgccaaaacgagtggtattcctgta
atattgataggtcatatcaacaaggaaggtaccattgcagggccaaagattttagagcat
attgttgatacagtaatccaatttgagggcgatcagcattatatgtatcgcattttgcgt
agcattaaaaaccgttttggctccacttcagaactaggtatttacgaaatgcaacaacag
ggattacgacaagtgagcaatccgtcagagttgctactcacgggcgaccatgaaggacta
tcaggagtagccatatcgagtgccatagagggggtgcgccccttcttagtcgagacacaa
gccttagtgtcatcagcagcttacggcacaccacaacgctctgccacaggcttcgatggt
cgccgactcaatatgttgttggctgtacttgaaaagcgagtaggctttaaaatcatgcag
aaagatgtgttcctcaatattgctggtggcttgcgtgttaccgatatggcaatggatttg
agtgtgatagctgccgttatctcttctaatcttgatatacctatagagcaaggttggtgt
atgtgtggagaagtgggcttgagcggtgaggtgcgccccgtcaatcgcatagagcaacgt
attgcagaagccgaaaaattaggtttcaaagacatcatcattcctaagtataacacacaa
ggattaacaggaaaatacaccataaagatccatcctgtacgcaaggtagaggaagccatt
cgcgaacttttcggataa
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