Prevotella bivia: QP022_06480
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Entry
QP022_06480 CDS
T09089
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbiv
Prevotella bivia
Pathway
pbiv03420
Nucleotide excision repair
pbiv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QP022_06480
03430 Mismatch repair
QP022_06480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiv03400
]
QP022_06480
Enzymes [BR:
pbiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QP022_06480
DNA repair and recombination proteins [BR:
pbiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QP022_06480
MMR (mismatch excision repair)
Other MMR factors
QP022_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WIL18862
LinkDB
All DBs
Position
2:201145..203664
Genome browser
AA seq
839 aa
AA seq
DB search
MILDDLNSYQREAVEYCNGPSLVVAGAGSGKTRVLTYKIAYLLEKGLKPWNILALTFTNK
AAREMKERIAKITHSHDTNRLYMGTFHSIFARILRAEAHHIGYNSNFTIYDESDSRSLLK
NIIKAMGYDEKVYRPNSVHHFISMAKNHLITAEEYAHDKLAIDRDKQARMPYIYSIYQAY
EARCKQANAMDFDDILVNTYVLLRDNQEVRQKYATLFEYILVDEYQDTNFAQVSIIQQLA
ELHQRVCVVGDDYQSIYSFRGANIDNILDFKQKFIGAKTFKLERNYRSTQLIVQAANSLM
KHNERQIPKEVYSQEDEGDKLQYKPCYSDKEEALIVAKEIQRIKRADNATYSDFAILYRT
NAQSRTFEDELRKQTVPYKIIGGLSFYQRKEIKDIIAYFRLVANNDDEEAFRRIINYPAR
GIGNTTIQKIVDCASKNNVSLWQVITNPLLYDLNVNKGTLAKINGFIELISNFIDRLSTT
DAYLLGKDIIQLSGISADIYSSTDPEALSRQENLEEFLSAMQDFVETGREEGREDYLYLT
DYLQEVALYSDADKADDNSPKVTLMTVHAAKGLEFPTVFIVGLEENIFPSPMSASSKREI
EEERRLLYVAITRAERHCIITNAKNRFRYGTMQFDNPSRFIKDIDPAFISEDSSTSFSNT
GYGGSRMAWDEKRSYTSSNSDNYRDYEPNRPYTGSRLWGSEYKQLGSRFQNNNPVASQFR
ADPQPKLTQRKRPEVAIDPLSDRTKRRILSEGGNLCRLTTAIKNGGRVIQNTPSNSKNFS
HSTSSTNSLTEGAIIEHQRFGIGKVIKVEGVGENAKATVDFQNIGQKQLLLKFAKYKIL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgatattagacgatttgaactcctatcagcgcgaagctgttgaatattgtaatggacca
tcacttgttgtagctggtgcaggttcaggtaaaacacgtgtcctcacctataaaatagcc
tatcttttagagaaaggattaaagccatggaatatacttgcgttaacttttaccaataag
gcagcacgtgaaatgaaagaacgtattgcaaagatcacccattctcatgatactaatcgt
ctttatatgggtacgttccattctatctttgctcgtattcttcgtgcagaagctcatcat
attggctataattcaaactttactatttatgatgaaagcgattcacgctcactgctaaag
aatataatcaaggcaatggggtatgatgaaaaggtatataggcctaattcagtgcatcat
tttatatcaatggcaaaaaatcacttaattactgctgaagaatatgcacatgataagttg
gctattgaccgcgataaacaagcacgtatgccctatatttattccatttatcaagcatat
gaagctcgttgtaagcaagctaatgctatggatttcgatgatattctcgtaaatacctac
gttttattgcgggataatcaggaggtaaggcagaaatatgctacactatttgaatatatc
cttgtggatgagtaccaagataccaacttcgcacaggtgtccatcattcaacaactggca
gaactccatcaacgtgtctgcgtagtgggcgatgattatcaaagtatttactcttttcgt
ggtgctaatattgataatatactagactttaagcaaaaatttattggggctaaaactttt
aagttagagcgtaactatcgttcaactcagctaatagtacaagctgctaactccctaatg
aagcataatgaacgacaaataccaaaagaggtttattctcaagaagatgaaggagataag
ttgcaatataagccttgctatagtgacaaagaagaggctttaatagtagctaaagaaata
cagaggataaaacgtgcagacaatgctacttattccgactttgccattctttataggact
aatgcccaaagtagaacttttgaagatgaattgcgtaagcagactgttccctacaagatt
ataggtggattgtcgttttaccagcgtaaagaaataaaagacattattgcttacttcaga
cttgttgcgaataatgacgatgaagaagcctttagacgtattattaattatcctgcacgt
ggcattggcaatactactattcagaagatagttgattgtgcctcaaaaaataatgtgagt
ctttggcaggttattacgaatccattgctatacgatctaaatgttaacaaaggtacgcta
gcaaaaattaacggtttcatcgagcttatttctaactttattgaccgcctttcaactaca
gatgcctatctattaggaaaagatatcattcaactaagtggtatttctgcagatatttac
tcaagtactgacccggaggcgttatctcgccaagaaaatctcgaagagtttctttcagca
atgcaagattttgtagaaactgggagagaagagggtagagaggactatctctatctaaca
gattatctacaagaggtggcgctctattcagatgccgataaagcagatgataattctccg
aaagtaacacttatgacagtccatgctgcaaaaggacttgagtttcccactgtttttatt
gtaggattggaagaaaatatatttcctagtcctatgtcagcaagctcaaagcgagaaata
gaagaggaacgaagactgctatatgtggccattactcgtgcagaacgtcattgtataatt
acaaatgctaaaaatcgctttcgttacggtacaatgcagtttgataatcccagccgtttt
atcaaagatattgaccctgcattcatatcagaagatagcagcactagcttttctaatact
ggatatggtggaagtcgaatggcatgggatgaaaaaagaagttatacttcatcaaactct
gataactatcgtgattatgaacctaatcgaccttacacaggtagtcgtctatggggaagt
gaatataaacaactaggaagtcgtttccaaaataataatcctgttgctagtcagtttcgt
gccgatccacaacctaagcttacacagcgtaagcgtccagaagtagcaatcgatcctcta
tccgatcgcacaaaacgccgtattctttcagaaggtggtaacttgtgtcggttaacaaca
gccataaaaaatggaggtagagttattcaaaacaccccatctaactcaaaaaatttttca
cattcaacgtctagcactaattcgctaacagaaggtgcgataatagaacatcaacgcttt
ggtataggaaaagttataaaggtggaaggggttggagaaaatgctaaagccacagttgac
ttccaaaatatagggcagaaacaattattgttgaagtttgctaaatataagatactataa
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