Prevotella bivia: QP022_07060
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Entry
QP022_07060 CDS
T09089
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbiv
Prevotella bivia
Pathway
pbiv03420
Nucleotide excision repair
pbiv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QP022_07060
03430 Mismatch repair
QP022_07060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiv03400
]
QP022_07060
Enzymes [BR:
pbiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QP022_07060
DNA repair and recombination proteins [BR:
pbiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QP022_07060
MMR (mismatch excision repair)
Other MMR factors
QP022_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
DNA_pol_A_exo1
AAA_30
AAA_12
AAA_11
AAA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIL19168
LinkDB
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Position
2:complement(332512..335196)
Genome browser
AA seq
894 aa
AA seq
DB search
MLMNNNLDKSQLPVVEANKGYHLVLAPPGCGKTHILAERIKNARAEGVAFKDMLCLTFTN
RAAREMESRIESLLHEDDISELQIGNVHHFCSKFLFEENKVPADASIIDDEEAVSIIADY
RNEDDERVIGDYQRYKGYQQIIFFSHLIYQLKHKHPWEIFLHPECLSREDREVVKYICKA
QRIEYNADAIIHIYEHAEVYMDDVNNFGVDHTLASKMLALLHKMYFASCYERYKTENHLL
DFEDLLLFTYDVYKKDKDSKHYKWIQVDEVQDLNGMQLAIIDLLTDKDNPVVMFLGDEQQ
AIFSFMGAKTDTLNLLKLRCKDNIHHLIKNHRSPKYLLDIFNTYAEKKLKIDKDLLPITD
NDIEADEDSLKLLYSNTIEDEIINIVAQAKELHRKNKEETTAIIVNSNADADKISKAMSK
IHLTHFKVSGKDLFDTPAMKLLLSHLSILSNEHNFIAWTRLMKGVNALDTNALSRRFNRK
LKQLSISPTDLLAYKENTYVNDFLNAFHQQEIVVFDTETTGLDVFTDDIIEISAIKIKEG
KIVGEPLDLYIYTDKPILQKLGTKENPLYEIYHKKLASGELLKANDALNKFIEFVDNSTL
IGHNINYDYHILDNCLKRYANDCMDNHSYKYFDSLKLIRLLEPSLRSYKLEYLLERFQLE
GINSHQSIDDVKATISLINYCADKAQLVVEKQMDFLNHKQVFKVANKLRAYYGEIYKEAK
ASLYEIHSTAEPILITSLVKAHNAFVADKTIDTVKRLDYVLRYIKLDLIGEDIGHNALVD
QLSHFMMDINTMKESDFCNSKSIKERIYVTTIHKAKGLEFDNIIVFDAVNGRYPNAYNKN
SKENEEDARKFYVALSRAKKRVLIAYALSQVDRYGNIHNREITPFMNDILKYFN
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgaataacaatttggataaaagccaattgcctgtagtggaagctaataagggt
taccatttagttttagcaccccctggttgtgggaaaacgcatattctagcggagcgaatt
aagaatgctagagcagaaggtgtagcttttaaagatatgctttgtcttacttttactaat
cgggctgcacgagaaatggaatcacgtattgaaagtttattacacgaggatgacatatca
gagttacaaataggaaatgtacaccatttttgttctaagtttttgtttgaagagaacaag
gttcctgcagatgcttctatcatagatgatgaagaagctgtgagtattatagctgattat
agaaatgaagatgatgagagagtaatcggtgattatcagcgatataaagggtatcaacaa
ataatattcttttctcatttaatatatcaactcaaacacaaacatccttgggagatattt
ctacatccagaatgtttatctagggaagaccgagaggtcgtaaaatatatttgtaaagca
caacgcatagagtataatgcggacgctattattcatatatatgaacatgcagaggtttat
atggatgatgtaaacaactttggcgtcgatcatacccttgcgtctaaaatgctagcttta
ctccataaaatgtattttgcttcttgctatgaacggtacaaaacagaaaaccatttgctt
gattttgaagatctattactctttacctacgatgtttacaagaaagataaagatagtaag
cattataagtggatacaagtagatgaagttcaggatttgaacggaatgcagctagctatt
attgacttactgaccgacaaggataatccagtggtaatgtttttaggcgatgaacagcaa
gctatattttcctttatgggtgcaaaaacagatacgcttaatctgctaaaactgcgttgc
aaagataatattcatcatctaataaaaaaccatcgttcgccaaaatatctgctagatatt
tttaatacttatgcggagaagaagcttaaaatagataaagatttattaccgattacagac
aatgatatagaggctgacgaagatagtttaaaactactttatagcaatactatcgaagat
gaaataatcaatatagtagcacaagcaaaggaactacatcggaagaataaagaagaaact
actgctattattgtcaactcgaatgctgatgccgataaaattagtaaagctatgtcaaaa
atacatctcacccatttcaaagtatcgggcaaggatttatttgatacgcctgctatgaaa
ttacttttatcgcatcttagtattttatctaatgaacataatttcatagcatggactaga
ttaatgaaaggagttaacgctttagatacaaatgctttatcaagaaggtttaataggaaa
cttaaacagttatccatatcaccaaccgacctattagcgtataaagaaaatacttacgta
aatgattttctcaatgcttttcatcagcaggagattgttgtttttgatacagaaacaacg
ggcttagatgtgtttacagatgacataatagagatttctgctataaagataaaggaaggt
aagatagtaggagagccacttgatctttatatctatacagataaacctattttgcaaaag
ttaggaacaaaagaaaatccattatatgagatttatcataagaagctagctagtggggaa
ttacttaaggctaatgatgcgttaaataaattcatagagtttgtggacaatagtacgctt
attgggcataatattaattacgattaccatatactagataattgtttaaaacgctatgca
aatgactgtatggataaccattcatataaatattttgactccctaaaacttattcggtta
cttgaaccttctcttcgttcatataaattagagtatttattggaaaggtttcagttggaa
ggcatcaatagtcatcaatctattgacgatgttaaagcaactatcagtttgataaattat
tgtgcagataaagcccaacttgtcgtagaaaagcagatggactttttaaatcataaacag
gtttttaaagtggctaataagttaagggcttattatggagagatttacaaagaggctaaa
gcaagtttatatgaaatacatagtactgctgaacctattcttattacctccttggtaaaa
gcgcataatgcttttgttgctgataaaacaatagatacagtgaagcgtttagattatgtt
ttgcgttatattaaattggatctaataggtgaagatataggtcataatgcccttgttgat
cagctctctcattttatgatggatattaatactatgaaagaaagcgatttttgcaatagt
aagagcattaaagaacgcatttacgttactactattcataaggctaaaggtttggaattt
gataatattattgtttttgatgccgttaatggtcgttatcctaatgcttataataagaat
tcaaaggaaaatgaagaagatgcccgtaagttttatgtggcattatcacgtgcaaaaaaa
cgtgttctaatagcctatgccttatcacaagtggataggtatggaaacatacataacaga
gaaattactccttttatgaacgatattctgaaatattttaattag
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