Prevotella bivia: QP022_07250
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Entry
QP022_07250 CDS
T09089
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbiv
Prevotella bivia
Pathway
pbiv03030
DNA replication
pbiv03430
Mismatch repair
pbiv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QP022_07250 (dnaE)
03430 Mismatch repair
QP022_07250 (dnaE)
03440 Homologous recombination
QP022_07250 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbiv03032
]
QP022_07250 (dnaE)
03400 DNA repair and recombination proteins [BR:
pbiv03400
]
QP022_07250 (dnaE)
Enzymes [BR:
pbiv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QP022_07250 (dnaE)
DNA replication proteins [BR:
pbiv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QP022_07250 (dnaE)
DNA repair and recombination proteins [BR:
pbiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QP022_07250 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WIL19007
LinkDB
All DBs
Position
2:377385..381110
Genome browser
AA seq
1241 aa
AA seq
DB search
MEDYIHLHVHTHYSILDGQSKINNLVDKAIKDGMKGMAITDHGVMFGIKEFADYCAKKNK
ERKANGEEPFKPIFGCEMYVARRKQTDKVKEMHDNSGYHLVVLAKNYNGYKNLIKLVSNA
WVDGYYYRPRTDREQLEKYHEDLIVCTACLAGEIPAKIRKGDIEGAREACLWYKNLFGED
FYLELQRHEVTDPTLIANREAYPLQQQVNKVLMQFSKEYGIKLVCTNDSHFEDKETAEAH
DHLLCLSTNEDLDDPKRMRYSKQEWFKTREEMNQVFEDVPEAMANTIEILNKVEMYNIDH
GPIMPFFPIPEDFGTEEEWRQKFSEEDLLKEFTSDENGENPLPEDEAKKVIERLGGYEKI
YRIKFEADYLAKLSYDGAKRLYGDQLSEEVDSRIRFELHVMKTMGFPGYFLIVQDFINAA
ENELGVIVGPGRGSAAGSVVAYCLGITKIDPLKYDLLFERFLNPDRVNLPDIDTDFDDDG
RGKVLQWVMDKYGHENCAHIITYSTMATKNSIKDVARVEKLPLDRSNALCKAIPDRLPDG
LKMNLKNAISCTPMLQEAMVSENERERNTIKYAKMLEGTVRGTGIHACGFIICRNPIDDW
VPVSTATDPDYPDQKVPVTQYDGHVIESTGLIKMDFLGLKTLSELKEACKVIKQTTGKEI
DIEKIPIDDELTYQLYQKGQTVGTFQFESAGMQKYLRELHPTVFEDLIAMNALYRPGPMD
YIPDFIKRKHDPTLVQYDIPCMEKYLKDTYGITVYQEQVMLLSRQLANFTRGESDALRKA
MGKKKKNIVDAMKPKFIKQGQENGHDPKVLEKIWSDWEKFASYAFNKSHATCYSWVAYQT
AYLKAHYPAEYMAALMTRRFSQITEITKLMEECKALKIETLGPDVNESQIGFGVNKRGEI
RFGLSAIKGIGTGAAENIVKERETNGPYKDIFDFVERVDLSSINRKVIENLAYSGGFDSL
GTITRREEYFGVNSKGEAFLDTLLRYGQLYQTSKAEAANSLFGGFDSIPVARPAVPPAEA
WANIEKLNKERELVGIYLSAHPLDEFSVVLNHLCNTHCSQISRNADMVALAKTEELTFGG
IVTNVREAFSQKTGKPYAFVTIEDFEGVGEIALFGDDWTRWSSFLKVSYTVYVTAKCQQR
YRYNPDLYSLNVQNVQQLYDVKTNRIERLTLSIDPSTLNEDMVNELTSVFEKHPGNTQLY
FKLRDPKNDNLLLHSRGAGINLDRKLITELDSYDNIEYKVN
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaagattatatacatttacacgttcacacccactattctattctcgatggtcagtcg
aagataaacaacctcgttgacaaagccataaaggatggtatgaaaggtatggctatcacc
gatcatggcgtaatgtttggcatcaaagaatttgctgattactgcgcaaagaagaacaaa
gagcgtaaagccaatggagaagaacctttcaaacccatctttggatgtgaaatgtatgtg
gctcgccgcaagcaaacagataaggtgaaagaaatgcatgataactcgggctatcaccta
gtggtgttggctaagaattataatggttataaaaaccttataaaactggtatcgaatgca
tgggtagatggctattattaccgcccaagaaccgaccgtgaacagcttgaaaaataccat
gaagaccttattgtttgtacggcttgtttagctggagaaatacctgcaaagatcagaaag
ggtgatatagagggggcaagagaggcatgtctatggtataaaaacttgtttggagaggat
ttctatcttgaacttcaacgacatgaagtaaccgaccctacactcattgccaaccgcgaa
gcatacccacttcagcaacaggtaaacaaggttttaatgcaattctcgaaagaatatggc
atcaaactagtatgtaccaacgatagccactttgaagacaaggaaactgctgaagcgcac
gaccacttgctttgcctctctaccaatgaggatttagacgatcctaagcgtatgcgctac
tcgaaacaagagtggtttaagacgcgtgaggagatgaaccaagtgtttgaagatgtacca
gaagcaatggcaaataccattgagattttaaacaaagtggagatgtacaacatcgatcac
gggcccattatgcctttcttccctatcccagaagattttggaacagaagaggaatggcga
cagaaatttagcgaagaagatcttttaaaagaatttacttccgatgaaaatggtgaaaat
ccattgccagaagacgaagctaaaaaggtaatagagcgtttaggtggttatgaaaagata
tatcgtattaagtttgaagccgattatttggcaaaactttcctacgatggggctaagcgt
ttgtatggggatcaattgtctgaagaggtcgatagccgtatccgctttgaacttcacgtg
atgaaaactatgggtttcccgggctatttccttatagtgcaagactttatcaatgctgca
gagaacgaacttggtgtaatagtaggtcccggacgtggatctgccgcaggatcggtggtg
gcttattgtctaggtattacaaagattgatcctctaaaatacgacttgctttttgagcgt
ttcttgaaccctgaccgtgttaatctccctgatattgataccgactttgatgatgatgga
cgtggcaaagtgctacaatgggtaatggataagtatggacatgaaaactgtgcacatatc
attacctactctactatggctacaaagaactccataaaagatgttgcccgtgtagaaaaa
ttaccactcgatcgctcgaatgcgctatgtaaagctatccccgaccgacttcctgacggt
ttaaaaatgaacctcaagaatgccatttcatgcacaccgatgctgcaagaagcaatggtg
agcgagaacgaacgtgaacgcaataccattaaatatgcaaagatgctagagggaacggtg
cgcggaacgggtattcatgcttgtggatttattatctgccgtaatcctattgatgattgg
gtgcctgtatctacagctaccgatccagactaccctgatcaaaaagtgcccgtaacccaa
tatgatggacacgtgattgagagtactggactgataaagatggactttcttggactgaag
actttgtcggagttgaaagaggcttgcaaggtaattaagcaaactactggcaaggaaatc
gacatcgaaaaaataccaattgacgacgaacttacttaccagctctaccaaaaaggacag
acagtaggtactttccagtttgaatcggctggtatgcagaagtatcttcgcgagttacat
cccactgtgtttgaggatctaattgcaatgaatgcgttgtatcgcccaggtccaatggac
tatatccctgattttatcaagcgtaaacacgaccctacccttgtacaatacgacattcct
tgcatggagaaatacctcaaggatacatacggcatcactgtttatcaagagcaagtgatg
ttgctttcacgccagttagccaactttacacgtggcgaaagtgatgcacttcgtaaggcg
atgggtaagaaaaagaagaacatcgttgatgccatgaagcctaagtttatcaagcaaggg
caagaaaatggacacgacccaaaggttcttgagaaaatttggagcgattgggagaagttt
gcaagctatgctttcaataagtcgcatgccacttgttactcatgggtggcttaccaaaca
gcctacctcaaagcacattatcctgcagaatatatggctgcgttgatgactagacggttt
agtcaaattactgaaatcacaaaattgatggaggaatgtaaggccttaaagatagaaaca
cttggccctgatgtgaacgaaagtcagataggctttggtgtaaataagcgtggtgagata
cgctttgggctgtctgctatcaaaggcataggtacaggagctgctgaaaacattgtgaaa
gaaagggaaacaaatggtccttataaggatatattcgactttgtagagcgtgtagatctt
agcagtattaaccgaaaagtaatcgaaaatttggcatatagtggaggttttgattcgctc
ggaacaatcacacgtcgtgaagaatactttggagtaaacagcaaaggagaagctttcctt
gacacactattgcgttatgggcagctgtatcaaacctcaaaagcagaagcagccaactct
ctatttggtggatttgatagtattcccgtagcacgacccgctgtgcctcctgctgaagca
tgggcaaacatagagaaattgaacaaagaacgtgaactggtaggtatctacctttcggct
catccactagatgaattttcggtagtcctcaatcatctttgcaacactcattgctcacaa
atcagccgaaatgccgatatggtagcgctagcaaagacagaagaattaactttcgggggc
attgtaaccaatgttcgcgaagctttctcgcagaaaacgggtaaaccttatgcatttgta
actatagaagactttgagggtgtaggcgagattgcgctctttggagacgattggacacga
tggagtagcttcctaaaagtaagctataccgtatacgttacagcaaaatgtcagcaacgc
taccgatataatccagatctttattcgcttaatgtgcaaaatgttcaacagctatacgat
gtgaaaaccaatcgtattgaacgcttaacgcttagcatagatccgtcaacgctaaacgaa
gacatggtaaacgaactgacctctgtttttgaaaagcatcccggtaatactcaactttat
tttaagttgcgcgatcctaagaatgacaacttgcttctccatagccgtggagcaggtata
aatcttgacagaaagctaattactgagcttgatagttacgataatatagaatacaaagtt
aattaa
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