Desulfobaculum bizertense: LWC08_00560
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Entry
LWC08_00560 CDS
T07819
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LWC08_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbiz03000
]
LWC08_00560
Transcription factors [BR:
pbiz03000
]
Prokaryotic type
Helix-turn-helix
Other families
LWC08_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
Mg_chelatase
HTH_8
AAA
AAA_3
MCM
Parvo_NS1
AAA_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UIJ38087
LinkDB
All DBs
Position
complement(118228..119814)
Genome browser
AA seq
528 aa
AA seq
DB search
MTRLAISSEKQSAYFQTLVRIVEEIGPRGSMQSGLKSLLRTLCENHGYKRALLTIFDPET
NSLKLTVTVGSQRYSEVSYQPGQGVTGQVMDSGESVIVPVQKDDPHFLNLAFGRTKEEMS
KLGFICVPVRHADDNNQTEVLGTLSVDVPAGTQEELEADCNFLQVVASLVAKEVASLQEE
MAMQRHLLAQGMTQEPHDSSDDTFSHPNIIAASKPMRMVLQQVSQVGPSRATVLLRGESG
TGKELLAEAIHSVSPRKNKPLIKLNCAALPAELIESELFGHVKGAFTGAVSSKKGLFELA
DGGTLFLDEIGELSLEAQAKLLRAIQEREIQRIGSEQTIRVDARLITATNRSLEQMLEDG
TLREDLFYRINVFPIFIPPLRERRLDILPLAEHFMQRFSEEYKKDVKRISTPAIDMLQQY
HWPGNVRELGNCMERAVLICDEEVIRTYHLPPSLQTAESSATDTNLSFGESVARFEQELL
VDALKKARGNMLQAARDLKASYRIINYKVKKYHLDPKKFAVGKSRKRS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcctagccatctcgtcagaaaaacagtctgcgtacttccagactcttgtacgg
attgttgaagaaatcggtccgcgtggttccatgcagtccggactcaagtccctgctgcgt
accctgtgcgaaaatcacggatacaaacgtgccctgctgaccatcttcgaccctgaaaca
aattccctcaaactgactgtcaccgtgggatctcagcgctattccgaggtctcctatcag
cccggacagggcgtgacaggtcaggtcatggactctggagaatctgtcattgtcccggtt
cagaaagatgacccgcattttctgaatctggcctttggccgtaccaaagaggaaatgtcg
aagcttggctttatctgcgtcccagttcgccatgcggacgacaacaaccagacagaagtc
ctgggaacgctttccgtcgacgttcctgccggaacgcaggaagagcttgaagccgactgc
aacttccttcaggttgtggcctctcttgtggccaaagaagttgcatcacttcaggaagaa
atggcgatgcaacgccacctgctcgcgcagggcatgacgcaggagccgcacgacagctct
gacgacactttttcgcatcccaatattattgccgcatccaagcccatgcgcatggtgctc
cagcaggtttctcaggttggccccagccgggccactgttctccttcgcggtgaatctggc
actggcaaggagcttctggccgaagcaatccacagcgtcagccccagaaaaaacaagcca
ctcattaagctcaactgtgcggctctgcccgcagaacttattgagtccgaactttttggc
cacgtgaagggcgcctttactggcgctgtttccagcaagaagggcctgttcgaactcgcc
gatggtggtaccctgttccttgatgaaattggtgaactttcccttgaggcacaggctaaa
cttttgcgcgccattcaggaacgcgaaattcagcgcatcggcagcgaacagaccattcgt
gttgacgcccgactcattacagcaaccaaccgctcactggagcagatgctggaggacggc
acccttcgcgaagaccttttttatcgcatcaacgtcttcccaatcttcattcccccgctt
cgggaacgtcgactggacatccttcctctggctgagcactttatgcagcgcttctccgag
gagtacaaaaaagacgtcaagcgcatctcgacccctgccattgatatgctccagcagtat
cactggccaggaaacgtccgcgaacttggcaactgcatggaacgcgccgtgctgatttgt
gacgaagaagttattcgtacctatcacctgccgccaagcttgcagaccgcagagtcttcg
gcaacagacaccaacctttcctttggtgaatccgttgcccgctttgagcaggaactgctt
gttgacgcgctaaaaaaagcccgaggcaatatgcttcaggctgcgcgtgatctcaaagcc
agctaccgcatcatcaactacaaggtgaaaaaatatcaccttgatcccaaaaaatttgcc
gttggcaaatccagaaagcggagctaa
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integrated database retrieval system
