Desulfobaculum bizertense: LWC08_01095
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Entry
LWC08_01095 CDS
T07819
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LWC08_01095 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiz03400
]
LWC08_01095 (uvrC)
DNA repair and recombination proteins [BR:
pbiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LWC08_01095 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
HHH_3
UPF0758_N
5_3_exonuc
HHH_8
Cdd1
Motif
Other DBs
NCBI-ProteinID:
UIJ38183
LinkDB
All DBs
Position
219174..221003
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AA seq
609 aa
AA seq
DB search
MYEFHSANFPLTPGVYLMKDVQGRIIYVGKAKRLRTRLASYFRNEERQTPKTRIMVSKIS
AVETLNTATEKEALLLEASLIKKHRPRYNIVLRDDKQYVLMKLSKRQEFPRLVMTRRVVR
DGSLYYGPFTSAHAARQTWKLMGRMFPLRKCGDKMFRNRIRPCLYYHIGQCLGPCVHHVS
TETYSAIVRQVELFLSGRTGELATQLRQKMLAASDALDFEQAAQYRDQLKAIEATVEQQS
VVLSTGSNLDVLGLAETVKGLGLALLFIRQGRLIGKKAHFWSGLGLEEGEEAVRGFLSQF
YSKSRFIPERILLPWELDDDTIQHVLEDFRQGPVSLRAPRSGAEKKLVELARANAAQAAP
RETDDPLDLRLQRALRLASPPRRIECVDISHLGGQGMRSGCVVFEDGQPVPSQYRTYLFE
ELEGSGDDYAALAAWAVRRAQSEGPQPDFVLVDGGKGQVSAVSRALKDAGFEGIWPFAGI
AKASAEDRQGPDRRAGVLDDRIFLPGRKNPLPIRPGSPELLFLQRIRDAAHDFVIGRQRQ
GRKKRMLQSELSSIPGIGPAMARQLWEHFGSIDAMCKASVVEIMELPGFGPKKAESLYTA
LQHLKKVSS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaattccattctgcaaattttcccctcactcccggcgtctatctgatgaaagat
gtgcaggggcgcatcatttatgtcggcaaggcaaagcgactgcggactcggcttgcgtca
tattttcggaatgaggagcgtcagactccaaaaactcggattatggtgagcaagattagc
gcggttgagactctcaacaccgcaaccgagaaggaagccctgctcctggaagcaagtctg
attaagaagcatcggcctcggtacaacatcgttttgcgggatgataagcagtatgtcttg
atgaagttgtccaagcggcaggagttccctcggcttgtgatgacgcggcgcgttgttcgt
gacgggtcattatattatgggccatttacctcagctcacgcggcccggcagacttggaag
cttatggggcgcatgtttccgctacgaaaatgcggagacaaaatgtttcggaacagaatt
cgcccatgtctctattatcatatagggcagtgcctcggcccctgcgttcatcatgtttcg
actgagacctattctgcaattgtccggcaggttgagctttttctctctgggcggactggt
gagcttgcaactcagctccggcagaagatgcttgctgcttctgatgcgttggattttgag
caggctgcccagtaccgggatcagctcaaggcgattgaggcgacggtcgagcagcagtct
gttgtgctaagcacagggtctaatcttgatgtgcttggtcttgctgagaccgtgaaagga
cttggtttggctctgctttttattcgacagggcaggctcattggcaaaaaagcacatttt
tggtctgggcttggtcttgaagagggggaagaggctgttcgcggctttttatcgcagttc
tattcaaaaagtcgttttattccagagcgtattctcttgccttgggagcttgatgacgac
accattcagcacgttctcgaagattttcggcagggtcctgtttcgcttcgagcccctcgt
tctggtgctgaaaagaagcttgttgagttagcccgagccaatgctgcgcaggctgccccc
cgtgaaacagatgatcccctggaccttcggctccagcgtgcccttcgtcttgcctcgcca
cctcgccggattgaatgtgtggatatttcccatcttggcgggcagggtatgcgttcgggc
tgtgtggtttttgaggatggccagcccgttccttctcagtatcggacctatctttttgag
gagcttgaaggttcaggtgatgactatgcggctcttgctgcgtgggccgttcggcgtgcg
cagtcagaagggcctcagcctgattttgttttggtggatggaggaaaagggcaggtttct
gccgtctcgcgggctttaaaagatgccggttttgaaggaatttggccttttgcaggtata
gcaaaagcttccgccgaagatcggcagggtccagacaggcgagctggtgttttggatgat
cggatttttctcccaggccgaaagaatccgctccccatccggccaggaagcccagagctt
ttatttttacagcgcatccgtgatgctgcgcatgattttgttattgggcggcagcgtcag
ggacgaaagaaacgaatgttacagagtgaactgtcgagtattcccgggattggtccggct
atggctcggcaactttgggaacattttggttccattgatgcaatgtgcaaagcctccgtc
gttgagattatggaattgccaggctttggcccaaagaaagctgagtcactttatacagct
cttcagcatttgaagaaggtttcttcataa
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