Desulfobaculum bizertense: LWC08_03200
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Entry
LWC08_03200 CDS
T07819
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LWC08_03200 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiz03400
]
LWC08_03200 (uvrB)
DNA repair and recombination proteins [BR:
pbiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LWC08_03200 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LWC08_03200 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
PH_GAC
AAA_16
DUF8104
DUF87
Kinesin
Motif
Other DBs
NCBI-ProteinID:
UIJ38590
LinkDB
All DBs
Position
698758..700782
Genome browser
AA seq
674 aa
AA seq
DB search
MPSRENISFDVPFQVESPFDPAGDQPQAIEGLAESIQQGVEDQVLLGVTGSGKTFTVAKV
IEAVQRPALILAPNKTLAAQLYNEFRQLFPHNAVEYFVSYYDYYQPEAYLPHSDTYIEKD
SSINDEIDKLRHAATHALLTRRDVIIVASVSCIYGLGSPEYYSRMVIPLEVGQQLSRDKL
VERLVEVHYERNDYDFHRGTFRIRGDVLEILPAYSNQQALRVEFFGDEVDSVKETDPVTG
KILQDVRKTVIFPASHYVSDRPNLQRAMDDIRDELGERLREYERDKKYLERQRIEQRTQL
DLEMIEELGYCNGIENYSRHLDGRQKDEPPATLLDYFPDDFLLFVDESHVTVPQIGGMYN
GDRSRKKTLVEFGFRLPSALDNRPLNFEEFLERKRQAVYVSATPGPWEMERSQGILVEQI
IRPTGLIDPQIDVRPVEGQVDDLLTECRTRRERGERVLVTTLTKRMAEDLTEYLQTMGVK
ARYMHSDIDTLERVAILQALRRGEFDVLVGINLLREGLDLPEVSLVAILDGDKEGFLRST
RSLIQTFGRAARNADGEVIIYADTVTRSMKAALEETDRRRERQVEFNTEHGIVPKTIFKK
MDNPLDSLYTKSESKDGSSAQNALEIDSDPKALAAEIKLLEREMRAAAKELEFERAAELR
DRIAQLREALRVLG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacgagagaatatttcttttgacgttccgtttcaggtcgaaagcccttttgac
cctgcaggcgatcagcctcaggccattgaggggcttgccgaaagcatccagcagggtgtg
gaagatcaggtgctccttggagttacagggtctggcaaaacctttaccgtggccaaggtg
attgaggcggtccagcgccctgcgcttatcctcgcccccaacaaaacgctggctgcacag
ctctacaatgaattccggcagcttttcccacataatgccgtggaatattttgtgagctat
tatgactattatcagccggaagcctacctgccgcactccgacacctacatcgagaaagac
tcgtccattaatgacgagattgacaagttgcgccatgccgcgacgcacgcgctcctgacg
cggcgcgatgtcattatcgtggcctcagtgagctgcatctatggccttggctctccggag
tattattcgcgaatggttattccgctggaagtggggcagcagctgagccgggacaaactt
gttgaacggctggttgaggtacattacgagcgcaatgactatgatttccatcgtggaacc
tttcgcattcgtggagatgtcctcgagattttgcctgcgtactccaatcagcaggctttg
cgcgtggagttctttggggatgaagtcgattcggttaaggaaacggacccggtgacaggg
aaaattttgcaggacgtgcgcaagaccgtcatcttccctgcgagccattacgtctctgac
cgtccaaacctccagcgcgctatggatgacattcgcgacgagctgggcgaacggctccgg
gaatatgagcgggacaagaaatatctggagcgtcagcgcattgaacagcgtacccagctt
gatctggaaatgattgaagagctgggttactgcaatggcattgaaaactattcccggcat
cttgatgggcgtcagaaagacgagccaccagcgactctgctggattatttccctgatgat
tttttgctctttgtggacgaatcgcatgtgaccgtgccccagattggcggcatgtataac
ggtgaccgttcgcgaaaaaagactctcgtggagtttgggttccgcctgccatctgccttg
gataaccgcccgctgaattttgaagaatttttggagcgcaagcggcaggctgtgtatgtg
tcggcaactcccggaccgtgggagatggagcgttcacagggaattcttgtggagcagatt
attcgtcctacgggactcattgatcctcagattgatgtgcgccctgtcgaggggcaggtt
gatgacctgctgaccgagtgccggacccggcgagagcggggtgagcgagtgctggtcaca
accctgaccaagcgcatggctgaggacctgactgagtacttgcaaacaatgggtgtgaaa
gcccgttacatgcattcagacattgatacccttgagcgtgtggcaattttgcaggcactg
cgccgtggcgaatttgatgtgctggtgggcattaaccttttgcgagaaggccttgacctc
ccagaggtctcgcttgttgcaattttggatggcgacaaggaaggtttcctgcgttcaacg
cgttcgcttatccagacttttggccgtgccgcgcgaaatgcagacggcgaggtcatcatc
tatgcggacaccgtgacccggtccatgaaagctgcgcttgaggagacagaccgccgccgt
gagcgtcaggtggaattcaataccgaacatggcatcgttcccaagacgattttcaaaaaa
atggataatccgctggattcactgtatactaagagtgaatccaaagacggttccagcgcg
cagaatgcactggagattgattctgaccccaaggccttggccgcagaaattaaactgctg
gagcgcgagatgcgtgccgctgccaaagaactggaatttgaacgtgctgccgagctgcgg
gatcgtattgcacagcttcgggaagcgcttcgggtgcttgggtaa
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