Desulfobaculum bizertense: LWC08_04055
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Entry
LWC08_04055 CDS
T07819
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz00541
Biosynthesis of various nucleotide sugars
pbiz01100
Metabolic pathways
pbiz01250
Biosynthesis of nucleotide sugars
Module
pbiz_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LWC08_04055 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbiz01005
]
LWC08_04055 (kdsA)
Enzymes [BR:
pbiz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LWC08_04055 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pbiz01005
]
Lipid A
LWC08_04055 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
STAS
Motif
Other DBs
NCBI-ProteinID:
UIJ38752
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Position
859864..860676
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AA seq
270 aa
AA seq
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MNAAELFELSSTGPFVLAGPCALESFDIALEAGKKVAEVTRELGLPAVFKSSFDKANRTS
VTSFRGPGMTQGLEMLQRIKDETGLPVVTDIHSPEQAGPVAEVADVLQIPAFLCRQTDLL
VAAGETGKIVNVKKGQFLAPWDMQHVVSKLRSTGNEKIWLTERGASFGYNNLVVDFRSLS
IMSSFGCPVIFDATHSVQLPGGQGGCSGGQREFVPTLARAAVAAGANGVFVETHPNPDTA
LCDGPNSWPLEKLGALLRDLKALWNLPHEC
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgaactctttgaactttccagcacgggtccgtttgttttagcgggcccg
tgcgcccttgaatcgtttgatatcgctttggaagctggcaaaaaggtcgcggaagtcacc
cgcgagcttgggcttcctgctgtttttaaaagctcctttgacaaggcaaaccgcacttcc
gttaccagtttccgtggccccggcatgacgcagggactcgaaatgctccagcgcattaag
gatgaaactggccttcctgtcgttactgacatccattctccagaacaggctggccccgtg
gccgaagtcgctgacgtgctccagatcccggcatttttgtgcaggcagacagatttgctt
gttgctgccggtgagacgggaaaaatcgtcaacgtcaaaaaaggtcagttcctcgctccg
tgggatatgcagcatgttgtgagcaaactgcgtagcaccggaaacgaaaaaatctggctg
actgaacgtggtgcctcttttggctacaacaatcttgttgtggacttccgttctctgtcg
attatgtccagctttgggtgcccggtcatttttgatgcgacccattctgttcagcttcct
ggcgggcagggcggatgctctggcggacagcgtgaatttgtgccaactttggcgcgagct
gcggttgctgctggtgcaaatggtgtgtttgttgaaacacatcccaatccagatacagcc
ttgtgtgatggcccgaattcgtggccgcttgaaaagcttggagcattgctccgtgacctg
aaggctctctggaatttgccgcatgaatgttag
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