Desulfobaculum bizertense: LWC08_04125
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Entry
LWC08_04125 CDS
T07819
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz00300
Lysine biosynthesis
pbiz00470
D-Amino acid metabolism
pbiz01100
Metabolic pathways
pbiz01110
Biosynthesis of secondary metabolites
pbiz01120
Microbial metabolism in diverse environments
pbiz01230
Biosynthesis of amino acids
Module
pbiz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LWC08_04125 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LWC08_04125 (dapF)
Enzymes [BR:
pbiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LWC08_04125 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UIJ38766
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Position
complement(870960..871841)
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AA seq
293 aa
AA seq
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MTYCPSATVPFYKMQGSGNDFVVIDNRTLKLPREAMSEWASKICPRAFGVGADGLIFLEN
APEGSELDFVWHFYNADGSRAEMCGNGSRCAARLGHELGFGSRTLVFGTDAGPIHAEVSE
SLDIVKVELTPPLDLALNAELDVDGQKISVHFVNTGVPHAVTIWDDVASLDVVKLGRALR
NHPHFAPAGTNVNFIEIKDKNHILIRTYERGVEGETYACGTGNAASALIAHELGLVDAEV
ELTTSGNEILNISIEKDTVFLQGKAIKTYKGEMYLEALGITPREEMRQCAHEL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacttattgccctagtgcaactgtcccattttataaaatgcagggcagtggaaacgat
ttcgttgttatcgacaaccgcaccctcaagctcccccgcgaagcaatgtctgagtgggca
tcaaaaatctgcccccgcgcctttggcgtcggtgccgatggcttgatctttctcgaaaac
gccccagaaggcagcgaactcgactttgtctggcatttctacaacgccgatggctctcgc
gcagaaatgtgcggaaacggctctcgttgcgccgcccgccttggtcacgaacttggtttc
ggctcccgtaccctcgttttcggtactgacgccggtcccattcacgccgaagtcagcgaa
agcctcgacatcgttaaagtcgaactgactccgcctctcgacctcgcgctcaatgcagaa
ctcgacgtcgacggacaaaaaatttccgttcactttgtgaacaccggcgtccctcatgcc
gtgactatctgggacgacgtcgcatctctcgacgtcgttaagctgggacgcgctcttcga
aatcacccacattttgcacctgctggtacaaatgtgaactttattgaaattaaagataaa
aaccatatcctgattcggacatacgaacgaggtgttgaaggcgaaacttacgcctgcgga
acaggtaacgccgcctccgccctcatcgctcacgagttgggactggtcgacgcagaagtc
gaactcaccacctccggtaatgaaattttgaatatctctattgaaaaagatacagttttc
ctccaaggtaaggctataaagacttataagggtgaaatgtatcttgaagctctgggaatc
actcccagagaagaaatgcgtcaatgcgcgcacgagctgtaa
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