Desulfobaculum bizertense: LWC08_05680
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Entry
LWC08_05680 CDS
T07819
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LWC08_05680 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbiz03019
]
LWC08_05680 (pnp)
03016 Transfer RNA biogenesis [BR:
pbiz03016
]
LWC08_05680 (pnp)
Enzymes [BR:
pbiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LWC08_05680 (pnp)
Messenger RNA biogenesis [BR:
pbiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LWC08_05680 (pnp)
Transfer RNA biogenesis [BR:
pbiz03016
]
Prokaryotic type
tRNA degradation factors
LWC08_05680 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UIJ39059
LinkDB
All DBs
Position
1204016..1206253
Genome browser
AA seq
745 aa
AA seq
DB search
MNTQTFSPVRTSAKLADGKEIIFETGKLAKQAHGSIWVQCGGTVVLVTVVTQPLPEDRGF
FPLTVEYKELAYAAGRIPGSFFRREVGRPSEREVLVCRLIDRPCRPMFPKTFRDEVQIIA
QVHSADEENDPDVLAICGASAALGISKTPFLGPIAGARIGYINKQFVYNPTYEQVKQSEL
NLVIAGTKDAVVMVEGSADFLPESLIADAIEWGHQQMQPVLQAQEELREKCGQPKIEIAE
HVEDAEVKAVVEEIATPKLEEALFIPEKLKRYAAKDAIKQEVMDVLNERFAEEPERIKGA
GDMINAITKRIVRSSIKDHKKRIDGRDLTTVRPLGIEVGLLPRTHGSALFSRGETMAMVT
ATMGSSRDEQRTDSLVGDCVKRFMLHYNFPPYCVGEARFLRGPSRREIGHGTLAERAIHP
ILPPAEEFPFTVRVVSEIMESNGSSSMASVCGSSLALMDAGIPVKCPIAGVAMGLIKEDD
EYLVLTDILGDEDALGDMDFKVAGSEDGVTAIQMDIKITGIPSEILRSALAQAKEGRLHI
LENMNAVLPESRGQVSKHAPQLEIVHVHPDKIRSIIGPGGKNIKAITAETGADIDIEDDG
RVSIFAPTRESLLQAKEMVQYHDQTAEVGKDYEGRVTRVIDCGAVVEILPGLDGLVHVSQ
LDIQRVEQPSDVTKVGDSMKVKVLEVEPSGRVRLSRKAVLMEEAGETIDLATFGKPKRGG
DRRGGDRDRRGGRGGDRRGGDRNRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacagactttttctcccgtgcgtaccagcgccaagctcgctgatggcaaggaa
atcatctttgaaaccgggaagcttgccaagcaggctcacggctccatctgggtgcagtgc
ggcggtaccgttgttctggttaccgttgttacccagcccctccccgaagatcgcggcttc
ttcccgctgaccgttgaatacaaggaactggcatacgctgctggccgcatccccggaagc
ttcttccgccgcgaagttggccgtcccagcgagcgtgaggttctggtgtgccgtcttatc
gaccgcccctgccgccccatgttccccaagaccttccgtgacgaagtccagatcattgct
caggttcactctgctgatgaagagaacgatcctgatgtgctcgccatctgcggcgcttcc
gctgctcttggcatctccaagactccgttcctcggccccatcgcaggtgcccgcatcggc
tacatcaacaagcagttcgtgtacaacccaacctacgaacaggttaagcagagcgaactg
aatcttgttatcgctggtaccaaggacgcagtcgtcatggttgaaggctccgcagacttc
ctgcccgaatccctgattgctgacgccatcgaatggggtcaccagcagatgcagcctgta
ctgcaggctcaggaagagcttcgcgaaaagtgcggccagcccaaaatcgagatcgcagag
cacgttgaagacgccgaagtgaaggcagttgtcgaagagatcgcaactcccaagctcgaa
gaagcacttttcatccctgaaaagctgaagcgctatgctgcaaaggacgcaatcaagcag
gaagtcatggacgtcctgaacgagcgctttgcagaagagccggaacgcatcaagggcgct
ggcgacatgattaacgccatcaccaaacgaatcgttcgttccagcatcaaggaccacaag
aagcgcatcgacggtcgtgacctcaccaccgttcgtccgcttggcatcgaagtgggcctg
ctgccccgcacccacggttccgccctgttctctcgtggcgaaaccatggctatggttact
gcaaccatgggtagctcccgcgacgagcagcgcactgactctctggttggagactgcgtc
aagcgcttcatgctccactacaatttcccgccgtactgcgtcggtgaagcccgcttcctg
cgtggaccttcccgtcgtgagatcggtcacggtactcttgcagagcgcgcaatccacccg
atcctgccgcccgcagaagagttccccttcaccgtccgtgtcgtttccgagatcatggaa
tccaatggttcctcctctatggcatccgtgtgtggttcttccctcgcactgatggacgct
ggtatcccggtgaagtgccccatcgcaggtgttgcaatggggcttatcaaggaagacgac
gaatacctggttctgaccgacatcctcggcgacgaggacgcactcggcgatatggacttt
aaggtcgctggttccgaagatggcgttaccgccattcagatggacatcaagatcactggt
attccttccgaaattctccgcagtgctctggcacaggccaaagaaggccgcctgcacatt
ctggagaatatgaacgctgttctgcccgaatcccgcggtcaggtctccaagcatgctccg
cagcttgagattgtccacgtgcatccggacaagatccgctccatcatcggccccggtggc
aagaacatcaaagccatcaccgccgagactggtgctgacatcgacatcgaagacgatggc
cgcgtttccatctttgctccgactcgtgagtctctgcttcaggccaaggaaatggttcag
taccatgaccagaccgcagaagtgggcaaagactacgaaggtcgcgttacccgcgtcatc
gactgcggtgctgttgttgaaattcttcctggcctcgacggtctggtccacgtgtcccag
ctggacattcagcgtgttgagcagcccagcgatgtgaccaaggttggcgacagcatgaag
gtcaaggttctggaagttgagccttctggccgtgtccgcctgtctcgcaaggctgtcctt
atggaagaagccggtgagaccatcgacctcgctacctttggcaagcccaagcgtggcggc
gaccgccgcggtggtgaccgtgaccgtcgtggtggccgtggtggcgaccgtcgcggtggt
gatcgtaaccgccgctag
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