Desulfobaculum bizertense: LWC08_07765
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Entry
LWC08_07765 CDS
T07819
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LWC08_07765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbiz03021
]
LWC08_07765
03400 DNA repair and recombination proteins [BR:
pbiz03400
]
LWC08_07765
Enzymes [BR:
pbiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LWC08_07765
Transcription machinery [BR:
pbiz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LWC08_07765
DNA repair and recombination proteins [BR:
pbiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LWC08_07765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UIJ39457
LinkDB
All DBs
Position
complement(1681626..1682669)
Genome browser
AA seq
347 aa
AA seq
DB search
MIIQDGDKLINTRNWSELVKPEQIIRDPKSNEAYGKFVCEPLERGFGTTIGNALRRVLLS
SLQGAAVVSVKIEGIQHEFMTMPGVLEDITDIVLNLKQVRFMMTTEEPQHLTLTADKKGE
ITAAAISENQNVTVLNKDKHIATLTENTPFKAELEVRMGKGYVPAEMLEGLSDEIGVIRL
DASFSPIKKVAYTIEQARVGQMTNYDKLILEVWADGSVIPEDAVAYSAKILKEQLSVFIN
FDEQSSDEEQTAQQSAMDLNPSLFKGIDELELSVRATNCLKSANIRLVGELVQRTEGEML
KTKNFGRKSLDEIRKVLAEMELEFGMTVENFDERYQEWLKRKESDEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatcatccaagacggcgacaaactgatcaacacccggaattggtccgagctggtcaaa
cccgaacagataatccgcgaccccaagagcaacgaagcttacggcaagttcgtttgcgaa
cctttggagcgtggcttcggtacgaccatcggaaatgcactgcgacgcgtcctgctctca
tctttgcagggagctgcagtggtgtcggtgaaaatcgagggcatccagcacgagtttatg
accatgccgggcgttctggaagacattacggacatcgtcctgaacctgaagcaggttagg
ttcatgatgaccaccgaggagccgcagcacctcaccctcactgccgacaagaagggcgag
atcacagctgccgccatctcggagaatcagaacgttactgttctgaacaaggacaaacat
atcgctaccctgactgagaatacgccctttaaggcagaactcgaagtcagaatgggtaaa
ggctatgttcctgctgagatgttggaaggtctgagtgacgagatcggtgttatccgcctc
gacgccagcttctcccccatcaagaaagtagcttataccattgaacaggctcgtgtgggt
cagatgaccaactacgataagcttatcctggaagtctgggccgatggctccgtcatcccc
gaggacgccgttgcgtactccgcaaaaatcctcaaggaacagctttccgtgttcatcaac
ttcgatgaacagtcctctgacgaagaacagaccgctcagcagtccgctatggacctcaac
ccgagcctctttaaggggatcgatgagcttgaactctctgttcgcgcaacgaactgtttg
aaaagcgcaaacattcgactcgtcggtgagctcgtgcagcgcaccgaaggcgaaatgctt
aagaccaaaaactttggtcgtaagtccttggatgagattcgtaaggttcttgccgaaatg
gaactcgaattcggtatgaccgttgagaatttcgacgaacgctaccaggaatggctgaag
aggaaagaaagcgatgaggcataa
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