Desulfobaculum bizertense: LWC08_09250
Help
Entry
LWC08_09250 CDS
T07819
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz00470
D-Amino acid metabolism
pbiz00550
Peptidoglycan biosynthesis
pbiz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LWC08_09250 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LWC08_09250 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbiz01011
]
LWC08_09250 (murD)
Enzymes [BR:
pbiz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LWC08_09250 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbiz01011
]
Precursor biosynthesis
Amino acid ligase
LWC08_09250 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
Pyr_redox_2
AlaDh_PNT_C
GIDA
Pyr_redox_3
2-Hacid_dh_C
FAD_binding_3
Thioredoxin_4
Motif
Other DBs
NCBI-ProteinID:
UIJ36925
LinkDB
All DBs
Position
complement(1979888..1981177)
Genome browser
AA seq
429 aa
AA seq
DB search
MRKELIGSEKGSRAVVVGAGKSGRDAARLLHELGADVNLLELMPKNVSVELQDECKDKGI
ALLTGPHKPEYFAGASRIVLSPGIPVGKIRECLPEGCTAELISELELAGRYATGKVLAIT
GTNGKTTTTSLSAHILREAGFRVFEGGNIGTPLSSYVLGDDEADVLVLEVSSFQAQNCTS
FAPEVGVFLNLSVDHQDYHRDMQEYLDAKLNLFAHMSEDSFVILPEEMRSQLAEQPFTKA
HRIYFESTDRFESELLPGEHNQCNMEAAFQALSRFGVSEREMRNALETYVPHPHRLERVG
EKQGILFVNDSKATTLASVKAALEAFDRPILLLAGGKYKGGDLESLAPLIKRKVRALGLF
GASRERFESAWEGLATMHWEPELGGAVRWLMTQAQEGDVMLLSPGTASFDLYDNYGQRGE
HFRTLFQEL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaggaattgattggaagcgagaaaggatctcgcgcggttgttgttggcgctgga
aagtctggtcgggatgcagcgcgactgctccatgagcttggagccgacgtgaacctgctg
gagctgatgcccaaaaacgtcagcgtggagttgcaggacgagtgcaaagacaagggcatt
gcccttctgaccgggccgcacaagcctgaatattttgcaggagccagccgcattgtcctg
tctcctggaatcccggtcggcaaaatccgcgaatgcctgccggaaggctgcaccgcggag
ctgatttccgagcttgagcttgccgggcgctatgccacaggaaaggtgctggcgattacg
ggcaccaatggcaagaccaccacgacctctctgagcgcacatattttgcgcgaagccgga
ttccgggtttttgagggaggcaacattggcacaccgctgtcgtcctatgtgcttggtgac
gacgaggccgatgttctggtgctggaagtttccagttttcaggcgcagaactgcaccagt
tttgcaccggaagtcggggtttttctgaatctgtccgtggaccatcaggactaccacaga
gacatgcaggaataccttgatgccaagctgaatctctttgcgcacatgagcgaagacagc
tttgtgattctgccggaagagatgcgcagccagcttgcggaacagccgtttacaaaggcg
caccgcatatattttgaatccacggaccgttttgagtccgagctgctcccgggtgagcac
aaccagtgcaacatggaagcagcatttcaggcgctgagccgctttggcgtgagtgaacgc
gaaatgcggaatgctttggaaacatatgtgccgcatccgcaccggctggagcgggtcggc
gaaaagcagggcatcctgtttgtaaatgattccaaagcaacaacccttgcctcggtcaag
gccgctctggaagcttttgaccgcccgattctgcttttggcaggaggcaagtacaagggt
ggcgatctggaatctctggccccgctcattaagcgcaaggttcgggccttggggcttttt
ggagctagccgggagcgctttgagagtgcatgggaaggccttgccaccatgcattgggag
ccagaactgggcggagctgtgcgctggcttatgacgcaggcgcaggaaggagatgtgatg
cttctttcgccgggaacggcaagctttgacctctatgacaactatggacagcgcggagag
catttccgcacactctttcaggagctttag
DBGET
integrated database retrieval system
