Desulfobaculum bizertense: LWC08_11310
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Entry
LWC08_11310 CDS
T07819
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pbiz
Desulfobaculum bizertense
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbiz03016
]
LWC08_11310
Enzymes [BR:
pbiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LWC08_11310
Transfer RNA biogenesis [BR:
pbiz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LWC08_11310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UIJ37312
LinkDB
All DBs
Position
complement(2457955..2460000)
Genome browser
AA seq
681 aa
AA seq
DB search
MTSPIVRCPSIGCIVELMHSNKPLLAWVLEEQNNRFRVLTINRREMKLPAARLLPWSGPA
ASADLNREEIMERLRNHEERRVQLISEIDPAEIWNFSQGEVERASSEWFAGLLWNEPDID
QIAAMGRVLLEHKSHFKFTSPDFEVFPEEVVEKRLREQAIREEREKIAAVGQKFFQALWN
ARTKSLPAPKCEEEMVQKLRDVLFAGMVENSSDPDFSIWNSLKKGLPDTPHLALLLAQTW
GIVPAHYNVQLLQEGYDWGDEWGAEYAEDIADLKEKFAQEEREPEATPFVSIDSASTRDI
DDAFYITQLEDGTLRLQVALACPCLNWEFESRFDRAIRDRASSLYLPEGTSHMLPETLGL
GLYSLLEGEARPALIADFLIKPTGEVMSMTPRHAWVRLASNTTYETVEAALEDGTAAKHF
VLAAELGKALRDQRIAAGAVILQRPDPKIVLEGEGDDTRVSIVHHAETPKAQLLVSEFMI
LANSALGHWANERSIPLLYRTQDVTFPGDAVGIWEAPEETYRVVRHMAPTCLEVEPKRHA
TLAVTAYSPITSPLRRYVDLLNMSQVTTYLRNDVPDIDAERLLRMVPLIVARVEAVGRLQ
RYRPRYWKLVYFSQRKHEFFSSVVVDDGPLVTVALPQEQLYLRAPQRLFGEKIYPGQHFA
IRLNKINPLLNEIRIVEALEE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcccattgttcggtgcccctctattgggtgcattgttgagcttatgcacagc
aacaagccgcttttggcttgggtgctcgaagagcagaataacaggtttcgcgttctgacc
attaatcggcgcgaaatgaaacttccggctgctcgccttttgccgtggtctggacctgct
gcttctgctgatttgaaccgcgaggaaatcatggagcgcttgcgcaaccatgaagaacgc
cgcgttcagctcatttctgaaatcgaccctgctgaaatttggaatttttctcagggagaa
gtggaaagagcatcaagtgaatggtttgccgggctgttatggaatgagccggacattgac
cagatcgctgcaatgggccgtgttctgctggagcacaagagccactttaaatttacttca
ccagactttgaggtcttccctgaggaagtcgtggaaaaacggcttcgggaacaggccatt
cgtgaggaacgggagaagattgccgcagttggtcagaagttttttcaggccctgtggaat
gcccgcaccaagtctctgcctgcgcccaagtgcgaggaggagatggtgcagaagcttcgt
gacgtgctctttgccggcatggttgagaactccagcgatccagatttcagcatttggaat
tccctgaaaaaaggcctgccagacactccgcaccttgcactccttcttgcccagacatgg
ggcattgttcccgcccattacaacgttcagcttttgcaggaaggctacgactggggcgac
gagtggggcgctgagtatgcagaggacatcgccgacctgaaagaaaaatttgcgcaggaa
gagcgcgagccagaagcgacaccctttgtcagcattgactccgcatcgacccgcgatatt
gatgacgcattttatatcactcagctcgaagacggcacgcttcggcttcaggtggccctt
gcctgcccctgtctgaactgggaattcgagtcccgttttgaccgcgcaattcgtgaccgc
gccagcagtctctatttgcccgaaggcaccagccacatgcttccggaaactctcgggctt
ggcctatacagccttttagagggtgaagcccgtcccgcacttattgcagattttctcatt
aagcccactggcgaagtgatgagcatgacccctcgtcacgcatgggtgcgtcttgcctcc
aacacgacgtatgaaactgtcgaagctgctcttgaggatggtacagccgcgaagcatttc
gttctcgctgccgagcttggcaaggcccttcgcgatcagcgcattgccgctggtgccgtt
attttgcagcggcccgatcccaagattgttctcgaaggcgaaggcgatgacacgcgcgtt
tccattgtgcatcacgccgaaactcccaaggctcagctccttgtgagtgaattcatgatt
ttagcgaactccgcccttgggcactgggctaacgagcgcagcatccctctcttatatcgc
acgcaggatgtcaccttccccggtgacgccgtcggcatttgggaggctcccgaggaaacc
tatcgcgtggtgcggcacatggcaccaacatgtcttgaggttgagccaaagcggcatgca
acgctcgccgtcactgcctacagtcccattacttcgcccttgcgccgctatgtcgacctg
ctcaacatgtcgcaggtgacaacctatttgcgcaacgatgttcccgatattgacgccgag
cgtcttctccgcatggtgcctctcattgtcgcgcgcgtcgaagccgttgggcggcttcag
cgctatcggccgcggtactggaagctcgtttattttagtcagcggaagcacgaattcttc
tccagtgtcgtcgtcgacgacgggccgctcgttactgtggcgttgcctcaggaacagctc
tatttacgcgcaccgcagcgactctttggtgaaaaaatctaccccggtcagcacttcgcc
attcggcttaacaaaattaatccccttcttaatgaaattcgcattgtcgaggcattagaa
gagtag
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