Desulfobaculum bizertense: LWC08_11940
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Entry
LWC08_11940 CDS
T07819
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pbiz
Desulfobaculum bizertense
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbiz01011
]
LWC08_11940
Enzymes [BR:
pbiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LWC08_11940
Peptidoglycan biosynthesis and degradation proteins [BR:
pbiz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LWC08_11940
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
SLT_2
CAP_assoc_N
Motif
Other DBs
NCBI-ProteinID:
UIJ37420
LinkDB
All DBs
Position
complement(2613261..2615120)
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AA seq
619 aa
AA seq
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MKNISSTAPDVQISGHTASKVFSLLCLMLAACALLSLSACVTTGQKAPDTPLISADAPPD
TPDERAEGSEQPNEEEVANFAQKDAMPLSPQEEQALSTKPDLSFELDSVETKEMLQFFRF
FTHDRRGRKSFERWLKRSEKYMPYVQTELAKRGLPHDLAFLPFVESGFNPKAGSHAGAKG
LWQFMPYTGKKYGLSVGWWLDERYDPYKSTHAAADYLTKLYSDFGDWYLALAAYNAGEGR
IMRALKSSGCDNYFDLSKKRSNRWRRGRRLYYLPKETRNYVPKFMAVIKIVRNLESLGFE
KPNWDREVTVQALETKPKTDLRRLASNVGMDWKAFRDMNPAYVEAGTHPERSSTIYLPQD
KITKAQEYLASSSFREYTGYYAFYRVRRGDSWYRISRRFGVSIAVLKKYNHRRSNLLRPG
QSLKVPGKGLTRSMVAQNKRSSKRSSRATSNGSYRVCKGDTLWVVAKRNGLSIGALARAN
NLPVRAHLKVGQRLYIPSSNAAARTRQLAQSRSNYTIRSGDSLWTIARKHNTTVATLARA
NGISRRATLRPGKSLYIPGRSASVTASSSKAAQKKYRVRRGDTLYAIARRFNTTTKKIMA
WNKLSSTNIRPGDSLTLYQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatatcaagcaccgctccagacgtacagatctccggccatacggcatcaaag
gttttcagcctcttatgccttatgctggctgcctgtgccctgctctctctttccgcctgt
gtgaccacaggtcagaaggctcctgatactcctctcatctccgcagatgcgccgccggat
accccggatgaacgcgccgaaggctcagagcagcccaacgaagaagaggtcgccaacttc
gcccagaaagacgcaatgcctctctcccctcaggaagaacaggccctgagcactaaacca
gaccttagctttgaactcgactctgtcgagaccaaagaaatgctccagttcttccgcttc
ttcacccatgatcgccgcggacgcaagagctttgaacgctggctcaagcgttccgagaaa
tatatgccctacgtgcagaccgagcttgccaagcgcggcctcccgcacgacctcgccttc
ctgccatttgtcgagagcggattcaacccaaaagctggctcccacgccggagcaaaaggc
ctttggcagttcatgccctacactggcaagaagtatggcctgagcgttggctggtggctc
gacgaacgctatgacccctacaagtcaacacacgccgctgccgactatctcaccaagctg
tattccgattttggcgactggtatctcgccctcgctgcctacaacgctggcgaaggccgc
attatgcgcgccctcaaaagctccggctgcgacaattatttcgacctttccaaaaaacgc
tcaaatcgctggcgccgcggccgcaggctctattacctccccaaagaaacccggaactat
gttcccaagtttatggccgtcatcaaaatcgtgcggaatcttgaatccctcggttttgaa
aagcccaactgggaccgcgaagtcaccgtacaggcccttgagaccaaacccaagacggac
ctgcgtcgcctcgcctccaacgtcggcatggactggaaagccttccgcgacatgaacccc
gcctacgttgaggccggtacccaccccgagcgttcttccactatttatctgccacaggac
aaaatcaccaaggcgcaggagtatctcgccagctcatccttccgcgagtacactggctat
tatgccttctatcgcgttcgtcgcggtgattcatggtatcgcatttcccgccgctttggc
gtctctattgccgtcctcaagaagtacaaccatcgccgttccaacctgctgcgccccggt
cagtcgttgaaggttcccggcaaaggcctcacccggagcatggtcgcgcagaacaagcgc
agctccaagcgctcctctcgcgctacttccaatggctcctaccgcgtctgcaaaggtgac
accctttgggtcgtcgccaagcgcaacggtctctccattggcgccctcgcccgtgcgaac
aacctccccgttcgcgcccatctcaaggtcggtcagcggctttacatcccgtcctccaac
gcagcagctcgcacccggcagctcgcacagtcccgctccaactacaccatcaggagtggc
gactcgctctggaccatcgcacgcaagcacaacaccaccgtcgcgactctcgcacgtgca
aacggtatctcccggcgcgctactcttcgccccggcaagtctctctacatccccggacgc
tccgcttctgtcacggcttcctcttccaaagccgctcagaaaaaatatcgcgtccgccgt
ggcgatacactctatgccatcgcacgtcgattcaacaccacgactaaaaaaatcatggcg
tggaacaagctctcgtctaccaatattcgccccggtgacagcttgaccttatatcaataa
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