Desulfobaculum bizertense: LWC08_12005
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Entry
LWC08_12005 CDS
T07819
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LWC08_12005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbiz02000
]
LWC08_12005
Transporters [BR:
pbiz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LWC08_12005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_16
SMC_N
NACHT
AAA_18
AAA_5
RsgA_GTPase
AAA
RNA_helicase
ATP-synt_ab
AAA_29
DUF5906
AAA_25
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UIJ37432
LinkDB
All DBs
Position
complement(2625177..2626142)
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AA seq
321 aa
AA seq
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MSSSPYLQIRDLTRTYEMSSGLLGLNRSAVHALNGISLDIMRGETLGLVGESGCGKSTLA
RLLMRLEAPSSGNIYLEGQSLWSQDPRFIDALPHKIQMIFQDPFSSLNPRRRVQSTIAEA
LTVQGMPRAERAERVQKLLALVGLRPEHATRYPHEFSGGQRQRIAIARALAPRPACIICD
EAVSALDVSIQAQVINLLRDLQERLGLTYVFISHDLAVIRAMSTRIAVMYFGQLMELSPA
QELYDRPLHPYTQALLKAIPIPDPKANRFALHLGGELPSPFLLPSGCPFHPRCPKALPIC
KEEHPGWKEISLGHSVSCHLY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgccatatctgcaaatcagggacctgacccggacttatgaaatgtcttcc
ggtttgctcggtctcaaccgctccgctgttcacgccctcaatggtatctccctcgacatc
atgcgtggcgagactctcggtcttgttggagaatctggctgtggcaaatccactcttgcc
cggctcctcatgcggctcgaagcgccaagctctggcaatatttatcttgaaggacaaagt
ctttggtcacaggacccacgtttcatagatgctctgccgcacaaaattcagatgattttt
caggaccccttctcttctctgaatccgcgccgtcgcgttcagagtaccattgcggaagcg
ctcaccgttcagggcatgcctcgcgcggagcgtgccgaaagggttcagaaacttctcgct
ctggttgggctacgtccagagcatgccacacggtatccgcacgaattttcgggcggccag
cgccagcgcattgccattgcccgcgctctcgctcctcgtcccgcctgcattatttgtgac
gaagccgtttcggccctcgacgtttccattcaggcacaggttatcaacctgcttcgcgat
cttcaggaacgtctaggattaacctatgtttttatttctcacgatctcgcggttattcgc
gccatgagtacccgcattgccgtcatgtattttggacagcttatggagttatctcccgcg
caagagctatacgacaggccccttcatccctacacgcaggcacttctcaaagcgattccc
atcccagacccaaaagcgaatcgttttgctctgcatcttggtggagaattacccagcccc
tttttactcccctcagggtgtccctttcatccgcgttgccccaaggctcttcccatctgc
aaagaagagcatcccggctggaaagaaatttctctaggtcacagtgtatcctgtcatttg
tattag
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