Desulfobaculum bizertense: LWC08_12290
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Entry
LWC08_12290 CDS
T07819
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbiz
Desulfobaculum bizertense
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbiz03400
]
LWC08_12290
Enzymes [BR:
pbiz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LWC08_12290
DNA repair and recombination proteins [BR:
pbiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LWC08_12290
Prokaryotic type
LWC08_12290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
UIJ37485
LinkDB
All DBs
Position
complement(2692049..2693422)
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AA seq
457 aa
AA seq
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MYDVHHARVETIREGETGKGPVIYWMSREQRAHDNWALLHAHSLAAQHKRPLGVVFCLAK
GFLEATRRQYDFMLRGLEETAQELDSLSIPFTVLKGDAPSVLPGFLNELDACTLVTDFDP
LRIKQEWQKQIASAVSIPIFEVDGHNVVPCRNVSDKQEYAAYTIRPKIHKKLDEFLEPFP
KLIPPSHSGLIFPTPDFAALHRWVDVDESVAPVCDVIPGSAAAQERLDDFLTATLPVYEP
ERNNPTLEGVSRLSPYLHFGQIAPQRVALDTAEHPGNAAGKEAFLEQLIVRRELTDNFCL
HNPQYDSIDGGPEWGLETLLKHEDDHREYSYSREELEQAKTHSPLWNAAQLQMVNTGYMH
NYMRMYWAKKILEWTSSPEEAVKIALYLNNRYELDGRDPNGYVGVLWAITGVHDRPWRER
DIYGSIRYMNSNGCRRKFKVDTYIKQYGNRPEQCSLL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgttcaccacgcccgcgtagagacaatacgcgagggcgaaaccgggaaaggt
cccgttatatactggatgagccgcgagcagcgcgctcacgacaactgggcactgcttcat
gcccacagccttgccgcacagcacaagcgacctcttggggttgtcttctgccttgccaag
ggttttctggaagcaacacgccgtcagtatgacttcatgctgcgcggtctggaagaaaca
gcgcaggagctagacagcctgtccattccctttaccgtgctcaaaggggacgcgccgtct
gtgctccccggattcctgaatgaactggatgcctgcacactggtgacagactttgacccg
ctgcgcatcaagcaggaatggcaaaagcagattgcctcggcagtcagcattcccattttt
gaagtggatgggcacaacgtggtgccctgtcgaaacgtctcggacaaacaggaatacgcg
gcgtacaccattcgccccaaaatccacaaaaaactggatgaatttctggaaccatttccc
aaactgatcccgccatcacacagtgggctgattttccccacgcccgactttgccgcactc
catcgctgggtggatgttgatgagagcgttgctccagtctgtgacgtcatcccaggaagc
gctgcggcccaggaacgactcgatgattttttgacggcaactcttccggtctatgaacca
gagcgcaacaacccaacactggaaggcgtatcccgactttctccctatctgcattttggg
caaatagctccgcagcgggtggcactggacaccgcagagcaccccggcaatgcagccggg
aaagaagcctttctggaacagctcattgtccggcgtgaactcactgacaacttctgcctg
cataacccgcagtacgacagcattgatggtggcccggaatggggccttgagacgctgctc
aagcatgaggatgaccaccgggaatacagctactcccgcgaagagctggagcaggccaag
acccattctccgctctggaatgcggctcagctccagatggtcaacaccggatacatgcac
aactacatgcgtatgtactgggccaaaaaaattctggaatggaccagttcccctgaggaa
gccgtgaagatcgccctgtacctgaataatcgctatgaactggatggacgagacccgaac
ggctatgtgggcgtgctctgggccatcacaggcgtacacgacagaccatggcgcgaacgc
gatatttatggctccatccgctacatgaattccaacggctgccgccgcaagttcaaggtg
gacacctacattaagcagtatggaaaccgcccggagcaatgtagcctgctctaa
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