Desulfobaculum bizertense: LWC08_12560
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Entry
LWC08_12560 CDS
T07819
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LWC08_12560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbiz02000
]
LWC08_12560
Transporters [BR:
pbiz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LWC08_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FEZ
Motif
Other DBs
NCBI-ProteinID:
UIJ37531
LinkDB
All DBs
Position
complement(2751621..2753177)
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AA seq
518 aa
AA seq
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MKRVLLACICALMLLGNSSVASAKTLKVAFAADPVSLDPHVQLSGGMLQYSHLVFDPLIR
WTKDMNFEPRLATKWERIDPLTERFYLRKGVKFHSGNDFTAKDVKWTFDRLKKSQDYKAL
FEPFEDIKIIDDYTIDIKTSKPYPLLLNMATYIFPMDSKFYTGMDEESGQPKDAIIKTGK
SFALNHESGTGKYKVTFREHGVRMEFTAFENYWDKKSGNVDKIILTPIKENATRVAALFS
GDVDFIMPVPPQDYDRIDKSEKVNLVTMPGSRIISLQMNQNKRPEFKDPRVRLAMIYACN
NAGIAKKIMKGRAVAAGQQAPEGYVSYQADLKPRYDLNKAKQLMKEAGYENGFTCTMISP
NNRYVNDEKIAQAFVSMMAKLKIRVDLKTMPKAQYWDAYDAQQADIQMVGWHPDTEDSSN
YTEFLLMCRDVKSGYGQYNSGNYCNEKVDSMIKSAQNETDLAKREAILKDVERIIYNDGA
FIPLHWEDLSWACSPKLQNVDEIVNVMNFPYFGDLNMD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtactcctcgcctgcatctgcgccctgatgctgctgggcaacagctcagtc
gcgtctgcaaagacgctgaaggtcgcattcgcagccgaccctgtttcccttgacccgcat
gtccagctttccggtggcatgctccagtattcccacctcgtttttgatccgctcatccgc
tggaccaaagacatgaacttcgaacctcgcctggctaccaagtgggaacgtatcgatccg
ctgaccgagcgcttctacctgcgtaagggtgtcaagttccactccggcaacgacttcact
gcaaaagacgtcaaatggacctttgaccgcctgaaaaaatctcaggactacaaggcactg
tttgagccttttgaagacatcaaaatcattgatgactacaccatcgacatcaagacctcc
aagccttacccgctgttgctcaacatggcgacctacatcttccccatggacagcaaattc
tacactggcatggacgaagagtctggtcagcccaaggacgccatcatcaagactggcaaa
tccttcgctctgaaccacgagtccggcaccggtaagtacaaggtcaccttccgtgagcac
ggcgtgcgcatggagttcaccgctttcgaaaactactgggacaagaagtccggtaacgtc
gacaagatcatcctgactcctattaaggaaaatgcaacccgtgttgcagctctcttctct
ggcgacgttgacttcatcatgcctgttcctccccaggactacgaccgcatcgacaagagc
gaaaaggtcaacctggttaccatgcctggttcccgcatcatcagcctgcagatgaaccag
aacaagcgccccgagttcaaggacccccgtgtccgtctcgccatgatctacgcctgcaac
aacgcaggtatcgccaagaagatcatgaagggtcgcgctgttgctgctggccagcaggct
cccgaaggctacgtcagctaccaggctgacctcaagcctcgctacgacctgaacaaggca
aagcagctcatgaaagaagctggctacgagaacggcttcacctgcaccatgatttccccg
aacaaccgctacgtgaacgacgaaaaaatcgctcaggcgtttgtttccatgatggcaaag
ctgaagatccgcgttgatctcaagaccatgcctaaagctcagtactgggatgcatatgat
gctcagcaggctgacattcagatggttggctggcaccccgacaccgaggactccagcaac
tacactgagttcctgctgatgtgccgcgacgtcaagagcggttacggccagtacaacagc
ggtaactactgcaacgagaaagtggacagcatgatcaagtcggctcagaacgagactgac
ctggccaagcgtgaagctatcctcaaagacgttgagcgcatcatctacaacgacggtgct
ttcatcccgctgcactgggaagacctctcctgggcttgttctcccaagctccagaatgtt
gacgagatcgttaacgttatgaacttcccctacttcggcgacctgaatatggactaa
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