Desulfobaculum bizertense: LWC08_13405
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Entry
LWC08_13405 CDS
T07819
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz00260
Glycine, serine and threonine metabolism
pbiz00460
Cyanoamino acid metabolism
pbiz00630
Glyoxylate and dicarboxylate metabolism
pbiz00670
One carbon pool by folate
pbiz00680
Methane metabolism
pbiz01100
Metabolic pathways
pbiz01110
Biosynthesis of secondary metabolites
pbiz01120
Microbial metabolism in diverse environments
pbiz01200
Carbon metabolism
pbiz01230
Biosynthesis of amino acids
pbiz01240
Biosynthesis of cofactors
pbiz04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LWC08_13405
09102 Energy metabolism
00680 Methane metabolism
LWC08_13405
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LWC08_13405
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LWC08_13405
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LWC08_13405
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LWC08_13405
Enzymes [BR:
pbiz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LWC08_13405
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Motif
Pfam:
SHMT
Aminotran_5
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
UIJ37677
LinkDB
All DBs
Position
complement(2936250..2937536)
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AA seq
428 aa
AA seq
DB search
MTDERAWGMPVTYLELLQKNDSAVYDAIEGEKNRQRLGVELIPSENYTYPEVLSALGSVF
TNKYAEGYPGRRYYGGQQYTDIIEDLARERAKQVFRCEHANVQPLSGSPMNQAVYLGLLE
PGDTILAMDLSHGGHLTHGAPVSHMGRIFNFERYKTNPADGSIDYDELLEIAKRTQPKLV
LCGYTSYPRDIDYDAFKRIADEVGAITMVDASHFAGLVAGGVLENPFDHGFDIMTTTTHK
SLRGPRGGMVLCRKEFAAKIDKSVFPGLQGGPHMNSIAGIAITLGKALEPEFKDYAEQVL
LNAKALAQAFIERGVTLVTGGTDNHMIVVDTEASFGIDGRVAEEILDTISITVNKQIIPD
DPNPPLRPSGIRMGSPAATARGMKEEHMKTLAGWMTVALQDPTNQALHKSIRSEVENLCR
TFPVPGID
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgagagagcgtggggaatgcccgtgacctatcttgaacttctccagaaaaat
gactccgcagtgtatgatgcgattgagggcgaaaagaatcgtcagcgtcttggtgtggag
ttaatcccttctgaaaattacacatatcctgaagtgttgagcgcacttggcagcgtattt
acgaacaaatacgccgagggatatcctggtcgccgttactatggtggccaacaatacacc
gacattatcgaggatctagctcgggagcgtgcgaagcaggtatttcgctgtgagcatgca
aacgtgcagccgctttctggatctccgatgaaccaggccgtataccttggtttactggag
ccgggcgacacgattcttgcgatggatctttctcatgggggacacctgacgcatggcgcg
ccggtatctcacatgggtcgcatcttcaattttgagcgttacaagacgaaccctgctgac
ggttctattgattacgacgagcttttggagattgcgaagagaacccagccgaagctggtg
ttgtgtggttacacttcctatcccagagacattgactacgacgcgtttaaacggattgcc
gatgaggtcggggcaattacgatggttgacgcatcgcattttgcgggactggtagcaggt
ggtgtgctggagaacccatttgatcatgggtttgacatcatgaccacgaccacacacaaa
tctcttcgcggtccacgcggaggaatggtgttgtgccggaaggaatttgcggcaaagatc
gacaagtctgttttccctggtttgcagggcggcccgcacatgaacagcattgcgggcatc
gccatcaccttagggaaggcacttgagcctgagttcaaagattacgctgagcaggtactg
ctgaacgcgaaagctctggcgcaggcatttattgagcgaggagtgacgcttgtaactggc
ggaacagataatcacatgattgttgttgatactgaagcgagctttggcattgacggtcgt
gttgcggaagagattctcgacaccatttcgatcactgtgaacaagcagatcattccagat
gacccgaatcctccgttacgtccgagcggaatccgcatgggtagccctgcggcgacggcg
cgggggatgaaggaagagcacatgaaaactctcgccggttggatgaccgtggccctgcag
gacccgaccaaccaggccctgcacaagtccattcggagcgaagtggaaaacttgtgcagg
acgttcccggtaccggggatagactaa
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