Paenibacillus beijingensis: VN24_00350
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Entry
VN24_00350 CDS
T03802
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbj03009
]
VN24_00350
Enzymes [BR:
pbj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
VN24_00350
Ribosome biogenesis [BR:
pbj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VN24_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJY73357
UniProt:
A0A0D5NEF8
LinkDB
All DBs
Position
complement(67719..68465)
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AA seq
248 aa
AA seq
DB search
MAAKKTLRLDKLLSNMGFGTRSEIKKAVKGGKVTVDGSVIKDPGLIVNPDTSIVEFEGER
VVYRDVVYWMLNKPQGVVSATEDNRDRTVIDLLKPEDRTLSPFPVGRLDKDTEGLLLLTN
DGQLAHDLLSPRKHVPKIYEALVRGDVGKEDADLFAAGVTLDDGYKTMPAELAIVSREQR
EDGIYSAIVLTIKEGKFHQVKRMFEAAGKKVTYLRRVSMGPLKLDESLPLGGYRGLTDDE
IGLLRADR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaaaagacactgcgtttggataaattgctttccaatatgggctttggcacc
cgcagcgaaataaaaaaggcggtcaaaggagggaaagtgaccgttgacggctccgtcatt
aaagatccggggctcattgtgaatccggacacttcgatcgtggaattcgaaggagaaaga
gtcgtctatcgggacgtcgtttactggatgctgaacaagccacaaggtgtcgtatcggcg
accgaggataaccgcgaccggaccgtcatcgatttgctgaagccggaggaccggacgctg
agcccgtttccggtcggacggctggacaaggatacggaagggctgctgctgctgaccaac
gacggacagcttgcccacgacctgctgtcgccccgcaagcatgtgccgaaaatatatgag
gcgcttgtgcgcggcgatgtcgggaaagaggatgcggatctgtttgccgccggagtaacg
cttgacgacggctacaagacgatgccggccgagctggcgatcgtttcgcgtgaacagcgg
gaagacgggatctattcggcgattgtgctgacaatcaaagaagggaagttccatcaagtc
aaacggatgtttgaagcggcaggcaaaaaagtgacctatttgcggagagtgtcgatgggg
ccgttaaagctcgacgaatcgctgccgcttggcggatatcgcgggctgacggatgatgag
atcggcctgctgcgcgctgaccgttaa
DBGET
integrated database retrieval system
