Paenibacillus beijingensis: VN24_00405
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Entry
VN24_00405 CDS
T03802
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj03030
DNA replication
pbj03430
Mismatch repair
pbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VN24_00405
03430 Mismatch repair
VN24_00405
03440 Homologous recombination
VN24_00405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbj03032
]
VN24_00405
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_00405
Enzymes [BR:
pbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VN24_00405
DNA replication proteins [BR:
pbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VN24_00405
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VN24_00405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
DEDDh_C
SpoVR
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJY73367
UniProt:
A0A0D5NEG6
LinkDB
All DBs
Position
complement(80157..80891)
Genome browser
AA seq
244 aa
AA seq
DB search
MKEQKGVGRMWQLYKMGGVTPAIASMLGAQNAQQMAFIRSMTKEQRKQSMLDEPLKEMEV
VVFDLETTGFYPYNGDEILSFGAVLLRGKELYPDRTFYSLVNPKRRVPKHITELTGISNE
MVADAPDLMQVLHDFMEFCGKRLLIAHGLGHDKQFLNAALWKTSKVNLTHRLLDTMMIAK
WLNPHRESYGLDELLETEKIKVTQRHHALKDSLMQAELWLLYLNRILERNITTLGDLYAY
LSKH
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcaaaaaggtgtcggccggatgtggcagctttataaaatgggtggcgtcacg
ccggccattgcctctatgctgggtgcgcaaaatgcgcagcaaatggcttttatccgctcc
atgaccaaagagcagcggaagcaatcgatgctggacgaaccgttgaaggagatggaagtg
gtcgtgttcgatctggagacgaccggcttctatccttacaacggggatgaaattttgtca
ttcggggcggtgctgctgcgcgggaaggagctgtacccggaccggacgttttacagtctt
gtgaatccgaaacgaagagtgccgaagcatattacggaactaaccggaatcagcaatgaa
atggttgcagacgcaccggatttgatgcaggtgctgcatgattttatggaattttgcggt
aaacggcttctgattgcacatggactcggccatgacaagcagtttttaaatgctgctctg
tggaaaacgtccaaggtcaatctgacccaccgtctgcttgacacgatgatgatcgccaaa
tggctgaacccgcaccgggaaagctacggtcttgatgaactgctcgagactgagaaaatt
aaagttacccagcgacatcatgcgctcaaagactcgcttatgcaggcagaattgtggctg
ctttatttgaaccggattcttgaacgcaatattacgacgcttggtgatttgtatgcttat
ttaagcaagcattaa
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