KEGG   Paenibacillus beijingensis: VN24_01635
Entry
VN24_01635        CDS       T03802                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj03030  DNA replication
pbj03410  Base excision repair
pbj03420  Nucleotide excision repair
pbj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VN24_01635
   03410 Base excision repair
    VN24_01635
   03420 Nucleotide excision repair
    VN24_01635
   03440 Homologous recombination
    VN24_01635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbj03032]
    VN24_01635
   03400 DNA repair and recombination proteins [BR:pbj03400]
    VN24_01635
Enzymes [BR:pbj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VN24_01635
DNA replication proteins [BR:pbj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     VN24_01635
DNA repair and recombination proteins [BR:pbj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     VN24_01635
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VN24_01635
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 DNA_pol_A_exo1 XPG_I
Other DBs
NCBI-ProteinID: AJY73566
UniProt: A0A0D5NE85
LinkDB
Position
complement(349499..352156)
AA seq 885 aa
MDKWILIDGNSIANRAFYAMPPLTNSAGLHTNAVYGFTTMLLKLLEEEKPTHLLVAFDAG
KVTFRHEGFSDYKGTRAKTPPELSEQFPIMKELLKAFGIAQFELAGYEADDIIGTMTRLA
DEKGVETLVVSGDKDMLQLASSKVSIAVTRKGVSEVERFTPETVNEKYGLKPHQIIDLKG
LMGDTSDNIPGIPGVGEKTALKLLHEYGSVEGVLENTGELKGKMKERVEQHRDDALMSKK
LATIFREVPLEGAEGGIAYGGFDAESVSAMFAKLEFRSLTERLNLSAPGAAQGAPKAELN
VVPVDPGDTEAASLLAAAFKKPNALFLESVGDNPHHADIIGAALAAEDTVYVLPKALLEG
AEGQFVRDWLSDPEASKIGCDLHRTELVLARLGVHLQGAEFDIQLAAYLLDPTESDQSVS
GIAQRSGLPAVASDESVYGKGAKFKVPDNATLYAHLASKADAVRAIAPLQRAELEKSGMN
RLYYELEQPLAVVLADMEKQGIKVDAETIQQLGKDLEHGIESSVSEIYRHAGTEFNINSP
KQLGEILFDKLGLPVMKKTKTGYSTDADVLEKLEPYHDIIPLILHYRQLAKLQSTYVEGL
LKEVRSETGKIHTYYRQTIAATGRLSSQYPNLQNIPIRLEEGRKIRKAFVPSEPGWYILA
ADYSQIELRVLAHISGDERLKEAFIHDMDIHTKTAMDVFGVSETQVDANMRRSAKAVNFG
IVYGISDFGLSQNLNITRKEAAKFIEQYFDVFKGVRKYMDDIVMQARQDGYVKTLLERRR
YLPEIKASNFNLRSFAERTAMNTPIQGTAADIIKLAMVRMQERLREEGLKSRMLLQVHDE
LVFEVPEDELEKMKTLVPEVMEGALALDVPLKADVNYGINWYEAK
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggataaatggattttgatcgacggaaacagcatcgccaaccgggctttctacgcgatg
ccgccgctgaccaattcggccggattacatacgaatgcggtttacgggttcacgacgatg
cttttgaagctgttggaggaggaaaagccgacccatttgctcgtcgcgttcgacgccggc
aaagtgacgttccgccacgaagggttcagcgactataaaggaacgcgcgcgaagacgccg
ccggagctctccgagcagtttccgattatgaaggagctgctgaaagcgttcggaatcgcc
cagttcgagcttgcagggtatgaagcggacgacattatcggaacgatgacgcggcttgcc
gacgagaagggcgtggagacgctcgtcgtctccggcgacaaggatatgctgcagctcgcg
tctagcaaggtgtcgattgcggttacccgcaaaggcgtgagcgaagtggagcggtttacg
ccggagacggtcaatgagaaatacgggctgaagccgcaccagattatcgacctgaaaggg
ctgatgggcgatacgtcggacaatattcccggcattccgggcgtaggcgagaagaccgca
ctcaagctgctgcatgaatacggctcggttgaaggtgttctggagaacaccggtgagctg
aagggcaaaatgaaagagcgtgtcgagcagcatcgtgatgacgcccttatgagcaaaaaa
ctggcgacgatcttccgcgaagttccgctggagggcgcggagggcggcatcgcttatggc
ggcttcgacgccgaatcggtgtcggccatgttcgcgaagctggagttccgttcgctgacg
gagcggctgaacttgtccgcccccggtgcggcccaaggggcgccgaaagcggagctgaac
gtagtgccggtagatccaggcgatacagaggcggcatccttgctagcggcggcattcaag
aagccgaacgcgcttttcttggaatcggtcggcgacaatccgcatcatgcggacattatc
ggggcggcgctggctgctgaagataccgtctatgtgctccctaaggcgctgctggaaggg
gcagaagggcagtttgtccgcgactggctgtccgatccggaagcttccaagatcggctgc
gatctgcaccgtacggagctggtgcttgcaaggctgggcgttcatctgcagggtgcggag
ttcgatattcagctcgccgcttatttgctcgacccgacggaaagcgatcagagcgtcagc
ggcattgcccagcgcagcgggctgccggcggtagcttccgacgaatcggtatacggcaaa
ggcgccaagtttaaagtgccggacaacgcaacgctctacgcccatcttgcttccaaggcc
gacgcggtccgcgccattgcgccgctgcagcgggcggagcttgagaagagcggcatgaac
cggctctattatgagctggagcagccgctcgcggtcgtgctggccgacatggaaaagcag
ggaattaaagtcgatgccgaaacgatccagcagctgggcaaagatttggagcacgggatc
gaatcttcggtgagcgaaatatacagacacgcgggaaccgagttcaacatcaattccccg
aagcagctgggcgaaatattgttcgataagctgggactgccggtcatgaaaaaaacaaaa
accggttattccaccgatgcggatgtgctggagaagctggagccgtatcacgatatcatt
ccgcttatccttcactaccgccaactggcgaagctgcagtccacctacgtggaaggtttg
ctgaaggaagtgcggagcgaaaccggcaaaatccacacgtactaccggcagacgattgcc
gcaaccggccgtctgtccagccagtacccgaacttgcagaacattccgatccggctggag
gaaggacggaaaatccgcaaggcgtttgttccgtccgagccgggctggtacattttggcg
gcggactactcgcagattgagctgcgggtgctggcccatatttccggcgacgaacggctg
aaggaagcttttatccacgacatggatatccatacgaaaacggcaatggacgtgtttggc
gtatcggagacgcaggtggatgccaacatgcggcgttcggccaaagcggtcaatttcgga
atcgtatacggcatcagcgatttcggactgtcgcaaaacctgaacattacgcgaaaagaa
gccgccaagtttatcgagcaatattttgacgtattcaaaggcgtgcgcaaatatatggac
gatatcgtcatgcaggcgcgtcaggacggttatgtgaagacgctgctggagcgccgccgt
tacttgccggaaatcaaggcgtctaactttaatctgcgttcgtttgccgagcggacggcg
atgaatacgccgattcaagggacggccgcggatattattaagctcgcaatggtgcggatg
caggagcgtctgcgcgaagaagggttgaagagccgcatgctgcttcaggtgcatgacgaa
cttgtatttgaagtgccggaggatgagctggagaagatgaagacgctcgtgccggaagtg
atggaaggggcgcttgcgctcgatgttccgcttaaggcggacgtgaattacggcatcaat
tggtacgaggcgaagtaa

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