Paenibacillus beijingensis: VN24_05360
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Entry
VN24_05360 CDS
T03802
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbj03019
]
VN24_05360
Messenger RNA biogenesis [BR:
pbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VN24_05360
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AJY74131
UniProt:
A0A0D5NFW1
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All DBs
Position
complement(1166938..1167903)
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AA seq
321 aa
AA seq
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MTLIKDMNAQDQFVGFYLLRELEVRQTNSTPPKDYFDIVLGDSSGQISAKFWDVSPTDKE
TFFPMALVKVKGIVQLYREKLQVKIMQIRKANDEDGVSLTDFIRSAPIRPIDLVHAIKQA
LGSITDREIHDLTAFCVDRAEEKLMHYPAAKTHHHAYYAGLAYHMARMLELGEFLCRQRP
FLNPDMLKAGIILHDIAKTEEMDARLGIVSEYSLTGKLIGHISIAASWITEAAVRLNIDP
RSEKVVALQHMVLSHHNLPEWGSPVLPQTAEAVALHHIDALDAKMQMVEDALDSTPDTEP
WTPPIRGLENKAIYRTNGTNV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacactaataaaagatatgaatgcgcaagatcagttcgtcggcttttacctgctgcgg
gagctcgaagtgaggcagaccaattcgacgccgcccaaagattatttcgatatcgtgctg
ggcgattcgagcgggcaaatatccgccaaattttgggacgtgtcgccgacggataaagag
acgtttttcccgatggcgcttgtgaaggtgaagggcatcgtgcagctgtaccgcgagaag
cttcaggtcaaaattatgcagatccgcaaggcgaacgacgaagacggagtgtcgctgacc
gattttatccgctccgcgccgatccggccgatcgatctcgtgcatgcgatcaagcaggcg
ctcggcagcataacggaccgcgaaatccacgatctgaccgccttctgcgttgacagagcg
gaagagaagctgatgcattatcccgcggccaaaacccatcatcacgcctattatgcggga
cttgcgtatcatatggcgcgcatgctggagctgggcgaatttttatgccggcagcggccc
tttttaaacccggatatgctgaaagcgggcatcattttgcatgatattgccaaaaccgaa
gaaatggacgcccggctcggcatcgtctccgaatacagtctgacgggcaagctgatcggc
catatttcgattgcagcgagctggattacggaagccgccgtccgccttaatatcgatccc
cggtccgagaaggtggtggcgctgcagcatatggtgctgtcgcatcacaaccttccggaa
tggggcagccccgtgctgccgcagaccgccgaggccgtcgccctgcatcatatcgacgcg
ctcgacgccaaaatgcagatggtcgaggatgcgctcgattcgacgccggacaccgagccg
tggacgccgccgatccggggactcgaaaacaaggcgatttaccggacgaacgggacgaac
gtgtag
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