KEGG   Paenibacillus beijingensis: VN24_06515
Entry
VN24_06515        CDS       T03802                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VN24_06515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbj03019]
    VN24_06515
Enzymes [BR:pbj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VN24_06515
Messenger RNA biogenesis [BR:pbj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     VN24_06515
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase SUa-2TM Flavi_DEAD HP0268 AAA_22
Other DBs
NCBI-ProteinID: AJY74297
UniProt: A0A0D5NH59
LinkDB
Position
complement(1433098..1434369)
AA seq 423 aa
MTFQDLNLIPAVLKALSKENYTTPTPIQEQAIPAVLAGRDLFGCAQTGTGKTAAFAVPIV
QLLSEQQIRPNTQRRIRSLILSPTRELALQISDNIQAYSQYTHLRSLAIVGGVSQKVQER
SLDQGADIVIATPGRLIDLMNQKRIDLQYVKILVLDEADRMLDMGFINDVKKIITKMPSK
RQTLFFSATMPPEISKMVKSLLVNPVKVEITPVSSTVDRIKQSVYKVDKENKQKQLNHLL
QDKSIASAMVFTRTKHGADRVVRELTKAKISAQAIHGNKSQNARQTALSNFRSGVTRVLV
ATDIAARGIDIEELSHVINFNLPNIPETYVHRIGRTGRAGQSGTAISFCEFDEIPYLKDI
EKLIGKTIPEVKDHPYPMLNTTQPLKAEGSSTSAAVLKPAKSKANSMPKPKSQWLRKGSK
TSR
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgacatttcaagatttaaatcttatacccgcggttttaaaagctttaagtaaagagaac
tatacgacgccgacacccattcaggaacaggcgatcccggctgtgttagccggcagagat
ttatttggctgcgctcaaacgggaacagggaagacggccgcatttgccgtaccgattgtc
caactattaagcgaacagcagatcagacccaacacacaacgccgtattcgctccttgatt
ttatccccgacaagagaacttgctcttcagatttcggataacattcaagcgtatagtcaa
tacacccatttgcgtagcttggctattgttggcggcgtttcacaaaaagtacaggagcgg
tcgcttgatcaaggtgcggatattgttattgcgactcctggcagactcatcgatttgatg
aatcaaaagcgaatcgatttacaatacgtcaaaatattagtactggacgaagccgacaga
atgctggatatgggctttatcaacgatgtgaagaaaatcatcacaaaaatgcccagcaaa
agacaaacgcttttcttctcggcaactatgccacccgaaatatccaaaatggttaaatcg
ctgctcgttaatccagtgaaggtggaaattacgccggtatcatctactgtggatcgaatc
aagcaatcggtttataaggtagataaggagaacaagcaaaagcaattgaatcacctctta
caagataaatccattgcttcggcaatggtttttacccgtaccaagcatggcgccgaccgt
gttgtgcgcgaactgaccaaagcgaaaatttccgctcaggccatccatggaaacaaatct
caaaatgcccgacagacggcattaagcaatttcaggagcggcgtgacgcgcgtgttggtc
gcgacggatatcgcagcaagagggattgatatcgaggaactttctcatgtgattaatttc
aatctccctaatattccggaaacatacgttcatcgaattggccgtaccggcagagcagga
cagagcgggaccgcgatctccttttgcgaatttgacgaaattccgtatctcaaagatatt
gagaaactgatcggaaagaccattcccgaagtgaaagaccatccctatccgatgctgaat
accactcagcctttaaaggcggaaggctcatcgacatctgcagcagtgttaaaaccagcc
aaatccaaggcaaattcgatgcccaagcccaagtcacagtggttgagaaaaggaagtaaa
acaagcagataa

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