Paenibacillus beijingensis: VN24_08310
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Entry
VN24_08310 CDS
T03802
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj00260
Glycine, serine and threonine metabolism
pbj00460
Cyanoamino acid metabolism
pbj00630
Glyoxylate and dicarboxylate metabolism
pbj00670
One carbon pool by folate
pbj00680
Methane metabolism
pbj01100
Metabolic pathways
pbj01110
Biosynthesis of secondary metabolites
pbj01120
Microbial metabolism in diverse environments
pbj01200
Carbon metabolism
pbj01230
Biosynthesis of amino acids
pbj01240
Biosynthesis of cofactors
pbj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VN24_08310
09102 Energy metabolism
00680 Methane metabolism
VN24_08310
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VN24_08310
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VN24_08310
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VN24_08310
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VN24_08310
Enzymes [BR:
pbj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VN24_08310
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJY74574
UniProt:
A0A0D5NGP6
LinkDB
All DBs
Position
complement(1857970..1859217)
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AA seq
415 aa
AA seq
DB search
MENLRKQDPELVKALGLELQRQRDNIELIASENIVSEAVIEAMGTVLTNKYAEGYPGKRY
YGGCEYVDIAENIARDRAKELFGAEHANVQPHSGAQANMAVYLAALKPGDTVLGMNLAHG
GHLTHGSPVNASGLLYNFVAYGVNEDTFTIDYEEVRKAAFKHRPRLIVAGASAYPRIIDF
EKLGQIAKDVGALFMVDMAHIAGLVAAGLHPSPVPHAHFVTTTTHKTLRGPRGGMILCTK
PWAAAIDKAVFPGSQGGPLMHVIASKAVALGEALQPSFKEYAQKIVNNAKVLSEALIAQG
LNLVSGGTDNHLMLIDTRNLNITGKDAEHVLDQVAITVNKNAIPFDPTSPFVTSGIRIGT
PAITSRGMDEAAMKTIAEVIAMTLKNPQDEAVLAAARGKVRDLTAQFPLYPALQY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttgcgtaaacaggaccccgaactggtaaaggcgctcggccttgagctgcag
cggcagcgcgacaacatcgaactgatcgcgtcggaaaatatcgtcagcgaagcggtcatc
gaagcgatgggtacggtgctgacaaacaaatatgcggaaggttatccgggcaagcgttac
tacggcggctgcgagtatgtggacatcgccgaaaatatcgcccgcgaccgcgcgaaggag
ctgttcggcgccgagcacgccaacgtgcagccgcactccggcgcgcaggcgaatatggcc
gtttatctcgcggcgctgaagccgggcgataccgtgctcggcatgaatttggctcacggc
ggacacttgacgcacggcagcccggtgaacgcttccggtctgctttacaactttgtcgca
tacggcgttaacgaagatacgttcacgatcgattacgaagaagtgcgcaaagcggcgttc
aagcatcgtccccgtctgatcgtcgccggagcgagcgcttatccgcgcatcatcgatttc
gaaaagctcggccaaatcgccaaagacgtaggcgcgctgttcatggtcgatatggcgcat
atcgcgggtctagtcgcggccggactgcatccaagcccggttccgcacgcgcattttgtg
acgacgacaacgcacaaaacgctgcgcggtccgcgcggcggcatgattttgtgtacgaag
ccgtgggcggcagcgatcgacaaggctgttttcccgggctcccagggcggaccgctgatg
catgtaatcgcgtccaaagcggtggcgctcggcgaagcgctgcagccttcgttcaaggag
tacgcgcaaaagattgtcaataatgcgaaggtgctgtccgaagcgctgatcgcgcaaggg
ctgaacctcgtctccggcggaacggacaaccatctgatgctgatcgatacgcgcaacctg
aatattacaggcaaagacgcggagcacgtactcgatcaagtcgccatcacagtgaacaaa
aacgcgatcccgtttgatccgacgagcccgtttgtaacaagcggcatccggatcggtact
ccggcgatcacgtcgcgcggcatggacgaagcggcgatgaagacgatcgcggaagtgatt
gcgatgacgctcaaaaatccgcaggacgaagccgtacttgcggcagcacgcggcaaagtg
cgcgatttgacggcgcagttcccgctttacccggcacttcaatactaa
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