Paenibacillus beijingensis: VN24_08800
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Entry
VN24_08800 CDS
T03802
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj03022
Basal transcription factors
pbj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VN24_08800
09124 Replication and repair
03420 Nucleotide excision repair
VN24_08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbj03021
]
VN24_08800
03036 Chromosome and associated proteins [BR:
pbj03036
]
VN24_08800
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_08800
Enzymes [BR:
pbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VN24_08800
Transcription machinery [BR:
pbj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VN24_08800
Chromosome and associated proteins [BR:
pbj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
VN24_08800
DNA repair and recombination proteins [BR:
pbj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VN24_08800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
AJY74658
UniProt:
A0A0D5NIC2
LinkDB
All DBs
Position
complement(1975489..1977882)
Genome browser
AA seq
797 aa
AA seq
DB search
METIQIAVRTLAEYAYRSGSIESGFRTSGTLTAGTKAHQEIQKSYGEHDEKEVLLKAEIP
FGGDLLFALEGRCDGLLTENGRTVIDEIKSTASELGRIEENTYPVHWGQACCYAYMYMLT
RLTPGHCELNDAGLMITVQLTYVQVNTGEAKRFRREMAFGELECLVADMLARYAPYTRLM
LRHKAERDRSIRELPFPFDAYREGQRKLAAAVYRSIERGEGLFAKAPTGIGKTMSTLFPA
VKAIGAGLLERIFYATARTTTRAAAEDALGRMASRGLKLHAVTITAKEKICFRETVSCRK
EDCEFADGYYDRINEALLDLLGNETLMSRDVVERYARKHRVCPFEYSIDAAYAADAVVGD
YNYAFDPRVSLKRMRDEHRKKTALLVDEAHNLPDRAREMVSAGLDKAAFLELQRAYKSAN
PALASAAKAVNARFIALRKQSAGGVSAESEAPLELLALAEAFASEAERELAARGGGVAEE
LLLETYFAVQHFISVGAMYDERYVTLTEVAGQAVSVKLRCLDPSEFIRQSAKSYRSRILF
SATLAPLSFYMDALGAAEEDRSLTVPSPYGREQLHVWVAPLSTRYSDRERTGASLTRLLR
VVTERRKGNYLVFFPSYAYMNIIAESFRMLTEESPGNAAHGSILVQRADMTEEERDAFLA
SFKAGDACARATEEKADSVIGFAVMGGAFSEGIDLVGDRLNGVVVVGVGLPQINAERDLI
KDYEERAGRNGFEYAYVYPGMNKVLQAGGRLIRSERDTGLLVLVDDRYLQPRYRKLLPEE
WRDFRVVEGKITDGVTW
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
gtggaaacgatacagatcgccgttcgaacgcttgcggaatatgcgtaccgcagcggcagc
atcgagtccggattccggacgtccggcacgcttacggcgggtacgaaagcccatcaggaa
atccagaagagttatggcgagcatgatgaaaaagaggtcctgctcaaagcggaaatacct
ttcggcggtgatctgctgtttgcgcttgaaggacggtgcgacggtctgctcacagaaaat
gggcggacagtgatcgacgaaatcaagtcgacggcatctgagctcggccgaatcgaggag
aacacgtatcccgttcattgggggcaggcatgctgctacgcgtacatgtatatgttgacc
cgtctcacgccggggcattgcgagttaaacgatgcgggcttgatgatcaccgttcagctg
acgtatgtacaggtgaacacgggagaggcgaagcggtttcgcagggagatggcgttcggc
gaactggaatgtctcgttgcggacatgctagcgcggtatgcgccgtacacccggttgatg
ctgcggcataaggcggaaagggaccggagcatccgcgagctgccgtttccgttcgacgcc
taccgcgaagggcagcgaaagctggcggccgccgtctaccgttccatcgaacggggagaa
gggctgttcgccaaagcgccgaccggcatcggcaagacgatgtcgacgctgttccccgcc
gtcaaggcgatcggggccggactgctggagcgaattttttatgctactgcgcgcacgacg
acccgggcggctgcggaggatgcgctcggacggatggcgtcgcgcgggctgaagctgcat
gcggttacgattacggccaaggaaaaaatctgtttccgcgaaacggtcagctgccgcaag
gaggactgcgagtttgcggacggatattacgaccggatcaacgaagcgctgctcgatttg
ctcgggaatgaaacgttaatgtcccgcgacgtcgtggaacgctacgcccgcaagcatcgg
gtatgcccgtttgaatattcgattgatgccgcttacgctgccgacgccgttgtcggcgac
tataattacgccttcgatccgcgcgtctcgctcaaacggatgcgggacgagcaccggaaa
aagacggctctgctcgtcgatgaggctcacaacctgcccgaccgggcaagggaaatggtg
tcggcggggctggacaaagccgcttttctcgaattgcagcgggcgtacaaatcggccaat
cccgctttggcctcggcggcgaaggcggtgaatgcccgctttatcgcgctgcgcaaacaa
agcgccggcggcgtttcggcggagtccgaggcgccgcttgagctgctcgcgctggcggag
gctttcgcctccgaagcggagcgggagctggcggcgcgcggaggaggcgtggccgaagag
ctgctgctggagacgtattttgcggtgcagcatttcatctcggtcggcgcgatgtacgac
gagcggtacgtaacgttgacggaggttgccggacaggcggtttccgtgaagctgcgctgt
ctggatccgtccgaatttatccggcagagcgccaaaagctaccggtcgcgcattttgttt
tccgctacgctggcgccgctctcgttttatatggacgcgctcggggccgccgaggaggac
cgttcgctgacggtgccgtctccttatggacgggagcagctgcacgtttgggtcgcccct
ttatccacccgatacagcgaccgcgaacggactggcgcatcgctgacgcggctgctgcgc
gtggtaacggagcggcggaagggcaattacctcgtcttttttccttcgtatgcctatatg
aacattatcgcggagtcgttccggatgctgacggaggaatcgcctgggaatgctgcgcat
ggaagcatcctcgttcagagggccgatatgacggaggaggagcgcgatgcgtttctcgct
tcgttcaaggcgggagacgcttgtgcccgggcaacggaggaaaaggctgactcggtcatc
ggatttgccgtgatgggcggggcgttctcggaaggaatcgatctggtgggcgaccgattg
aacggtgttgtcgtggtaggagtggggctgccgcaaataaatgccgaacgcgatctgatc
aaggactacgaagagcgcgcgggaagaaacgggtttgaatatgcgtatgtataccccggc
atgaacaaagtgctgcaggcgggcggacggctcatccgctcggagcgcgataccggtctg
cttgtactcgtcgacgaccggtatttgcagccccgatatcggaagctgctgccggaggaa
tggcgggattttcgcgtcgtggaagggaaaatcacggatggtgttacttggtaa
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