KEGG   Paenibacillus beijingensis: VN24_12790
Entry
VN24_12790        CDS       T03802                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pbj  Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbj03016]
    VN24_12790
Enzymes [BR:pbj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     VN24_12790
Transfer RNA biogenesis [BR:pbj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VN24_12790
 Prokaryotic type
    VN24_12790
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344 DUF3775 Gal-bind_lectin
Other DBs
NCBI-ProteinID: AJY77696
UniProt: A0A0D5NR15
LinkDB
Position
2802300..2803019
AA seq 239 aa
MTLSYDGTNYNGFQTQPAGNTVQDLIEAAIEQLTGERLKITGSGRTDAGVHARGFVFNFY
TNSQIPVKRWALALNSRLPHDIVVLDAAEVDDDFHSRRCAKRKTYRYSIDRSKFRDVFVR
HTHFHHPMPLDVPAMRQALKHLLGTHDYTSFTSTRSTKQSHVRTIFEAHLVEEGPMLHLY
ITGSGFLYNMVRIITGTLMWVGEGKMQPDDFARILQARNRSCAGPTAMAHGLTLWQVEY
NT seq 720 nt   +upstreamnt  +downstreamnt
atgacgttaagctacgacggaacgaactataacggctttcaaacgcagccggcaggcaat
acggtgcaggacctcatagaggctgcgatcgagcagctgacgggagaacgtctcaaaatt
accggatcgggccggacggacgcgggcgtgcatgcgcgcggcttcgtatttaatttttat
acgaattcgcaaattccggtcaaaagatgggcgcttgcgctcaacagccggctgccgcac
gacatcgtcgttctcgatgcggcggaagtggacgatgactttcattccagacgctgcgca
aagcgcaagacgtaccgttactcgatcgaccgcagcaagtttcgggatgtgttcgtccgt
catactcactttcatcatccgatgccgcttgatgtgccggctatgcggcaggcgcttaag
catctgcttggaacgcacgattatacgtcgtttacgtccacgcgttcgacaaagcaatcg
catgtgcggacgattttcgaagcccatctcgtggaagagggacctatgctccacctgtat
ataaccggcagcggctttttgtataatatggtccggatcataacgggaacgctcatgtgg
gtcggggaaggcaaaatgcagcccgacgattttgcgcgtattttgcaggcgaggaaccgc
agctgcgccgggcctactgcgatggcgcatggcctgactctatggcaggtggagtattag

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