Paenibacillus beijingensis: VN24_19280
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Entry
VN24_19280 CDS
T03802
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_19280
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VN24_19280
Archaeal homologous recombinant proteins
VN24_19280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AJY77853
UniProt:
A0A0D5NSH0
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Position
4275387..4276556
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AA seq
389 aa
AA seq
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MKFIHTADWHLGKLVQGVYMTEDQRHVLNQLAAAVAEEKPDAVVIAGDLYDRAIPPVEAV
ELLNELLEKIVVELETPVLAISGNHDSPDRLQFGAKMMERRGLHLAGQLKADMRPAVLRD
AYGEVHFHLVPYADPAMVRYTFGDEDIRTHDDAMKAVTAKIAAGMDPKARHVLVGHAFVT
PGGLPQANTSESERPLSVGGAEHVHAEYFKPFHYTALGHLHQAHYVAQETVRYAGSPLKY
SISEENHRKGYLIVELDQDGRAAVEKREFVPLRDMRRISASIEELESHSPCNDYVFVTLL
NDNPVLFPMEKVRAVYPNALHVERRMTMRAQGGDKDAAEAEAQSRSQTDPVSLFASFYRE
VNGADLSEGKTKLFAEVYTELLRTEGGAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttatacatacggcggactggcatctcggcaagctggtgcagggggtctatatg
accgaggatcagcgtcatgttctcaatcagctggcggcggcggtggcggaagagaagccc
gatgcggttgtcattgcgggcgacctgtacgaccgcgcgataccgcccgttgaggcggtc
gagctgctgaacgagctgctggagaagatcgtcgtggagctcgaaacgccggtgctggcg
atatcgggcaatcacgacagtccggaccggctccagttcggcgccaaaatgatggagagg
cgcggtctccatctcgccgggcagctgaaagcggacatgcggcccgcggtactgcgggat
gcgtacggagaggtgcattttcaccttgtgccttacgcggaccccgcgatggtgcgctat
acgttcggggatgaggatatccgcacccacgacgacgccatgaaggcggtgacggctaaa
attgcagctggcatggacccgaaggcgcgtcacgtgctggtcggacatgcgttcgtgacg
ccgggcggcctgccgcaggcgaacacgagcgagtcggagcgtccgctgtcggtcggcgga
gcggaacatgtgcatgcggaatatttcaagccgtttcattatacggcgctcggccatttg
caccaggcgcattacgtggcgcaggagacggtccgctacgccggctcgccgctgaaatat
tccatttccgaggagaatcaccgcaaaggctatttgatcgtggagctggaccaggacggc
agggcggcagtggaaaagagagaatttgtgcctctgcgcgatatgcgccgtatctcggct
tcgatcgaagagctggagagccattccccttgcaacgattacgtctttgtgacgctgctc
aacgacaaccccgtcctgtttccgatggaaaaagtaagggcggtttatccgaacgcgctg
catgtggagcggcgtatgacgatgcgcgcccagggcggcgataaggatgcggcagaggca
gaggcgcaaagccgctcccagacggacccggtatctttgttcgcgtcgttttaccgggaa
gtgaacggagcggatctgtccgaagggaagacgaagctgttcgcggaagtttatacggag
ctcctgcgtacggaaggaggagccgtatga
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