Paenibacillus beijingensis: VN24_19285
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Entry
VN24_19285 CDS
T03802
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_19285
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VN24_19285
Archaeal homologous recombinant proteins
VN24_19285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
KASH_CCD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJY76317
UniProt:
A0A0D5NMU2
LinkDB
All DBs
Position
4276553..4279645
Genome browser
AA seq
1030 aa
AA seq
DB search
MKPLSLTMTAFGPYRDAEKVDFGLLRDSRLFVITGSTGAGKTTIFDAICFALYGSASGED
RSETRMLRSHFADDETHTSVEFEFSVGVRSYRVFRQLAHRKGTNKSETGGKAELYETTSG
EPVPCVDRFAVSDVNAKLERIVGLTREQFSQIVMLPQGEFRKLLTSDTENKEDILRRLFQ
TGLFRKLEERFHRKHREMTDAVKESRAKVEFHLQQAEESLPLREESALAAALGQEHRSAL
QVMEGLAAEAAYYREVSGIAEARKTRLAAEVESRQLRVHEAAVLNGRLDELDGKRRQLAR
LAERKSELEALERRLALAEQASRLQPYEEQADKAAAEARMCRVRHEEKRLAAEAAAKTLA
QAEQAYRAEEAREPQRREAGRELERLGGLLPLVETLGERQAELERLGAQQRQLEAQLQAR
DEELGRLREVLRAGSEAAAKLEAEAAALPEKLELRSAMGEKYRLLKELTELKKRLDGFVE
LSGAREGAARLIRAEMDRMEALWIEGQAASLAAHLHEGEPCPVCGSVQHPGKAKSGGAVP
SREELQQAKERLRHAERELEEAKAQAAASREGWESGIAVMDRYGIVPDGLERQLSLLEHE
GKQLRAEIDRLKAQGEELSRLRAERKTLEERAERTGAEKERLLGLRQQHAVELAAKKSLL
DKELEQIPDGLRSPAVVRSRLQEQQRLSQSLEAAWKEAGERLQRARTAEAEERASAAQLL
ARLGEAEESALQAAERFASELAAAGFGGNQSYKEAKLSERERQAGRESIEAYRTEAAALA
QAVRELERELAGKQRIDVELLSAELAATKRELEETDAALRTAALLAGSAERLGAAIADAR
KRCAELESGLEEVADLYAMLKGDNPLKISFERYILIEFLEQILHAANERLRDLSNGQFVL
ERSGRLETRGKQSGLGLDVYDAYTGQNRDVKTLSGGEKFNASLALALGMTDVIQAHQGGI
SIEMMFIDEGFGSLDEESLNKAILTLIDLQRAGRMIGVISHVQELKQAFPAVLEVKKTKE
GHSRTAIYLK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctatcgctgacgatgaccgctttcgggccttaccgcgacgcggagaaggtc
gatttcgggctgctgcgggattcgcggctgttcgtcatcacgggcagcacgggcgcgggc
aagacgacgatttttgacgcgatctgctttgcgctgtacggatccgccagcggagaagac
cgttcggaaacgcggatgctgcgcagccattttgccgacgacgagacgcacacgtccgtt
gagttcgaattttcggtaggggtgcgctcctaccgcgtattccgccagctcgcccaccgc
aaagggacgaacaaaagcgagaccggcggcaaggccgagctgtacgagacgactagcggc
gaaccggttccgtgcgtcgaccggtttgcggtgtcggacgtcaacgccaagctggagcgg
atcgtcgggctgacccgggagcagttcagccaaattgtgatgctgccgcagggcgagttt
cgcaagctgctcacgtccgatacggagaacaaggaggatattttgcggcggctgttccag
acgggactgttccgcaagctggaggagcggtttcaccgcaagcaccgggagatgacggac
gccgtcaaagaaagccgcgccaaagtcgaatttcatctgcagcaggcggaggaaagcttg
ccgctccgggaggagagcgcgcttgccgccgcgctcgggcaggaacaccggagcgcgctg
caggtgatggaagggcttgccgccgaagcggcttattaccgggaagtttcggggattgcg
gaggcgcgcaagacgaggcttgcggcggaggtcgagtcccggcagctgcgcgttcacgag
gcggctgtgctgaacgggcggctcgacgagcttgacggcaagcggcggcagcttgcccgg
cttgccgagcgcaagagcgagctggaagcgctggagcggcggctcgcgcttgcggagcag
gcgtcgcggctgcagccgtacgaggagcaggccgataaggcggccgcggaagcccggatg
tgccgcgtccggcacgaggagaagcggcttgccgccgaggcggccgcgaagacgcttgcg
caggcggagcaggcttaccgcgccgaggaagcgcgcgagccgcagcgccgggaagccggc
cgcgagctggagcggctcggcggcctgctgccgctcgtggagacgctgggcgagcggcag
gcggagctggagcggctcggcgcgcagcagcggcagctcgaggcgcagctgcaggcgcgc
gacgaggagctggggcggctgcgggaggtgctgcgcgccggcagcgaagcggccgccaag
ctggaggcggaagcggctgctctgccggagaagctggagctgcgctcggcgatgggcgag
aagtacaggctgctgaaggaattgaccgagctgaagaaacgattggacggttttgtagag
ctgtccggcgcaagggaaggggcggcgcgtctcatccgcgcggagatggaccgcatggag
gcgctctggatcgaaggccaggcggcgtcgcttgccgcccatctgcatgagggcgagccg
tgcccggtttgcggcagcgtgcagcatccgggcaaagcgaaatcgggcggagcggtgccg
tcgcgggaagagctgcagcaggcgaaggagcggctgcgccacgcggaacgcgagctggag
gaggcgaaggcgcaggcggccgcgtcccgcgagggctgggaaagcggtatcgccgttatg
gaccggtacggcattgtgccggatgggctggagcggcagctttcccttctggagcatgaa
ggcaagcagctgcgcgcggagatcgaccgcttgaaggcacagggcgaagagctgagccgg
ctgcgcgcggagagaaagacactggaggagcgggcggaacggaccggggccgagaaggaa
cggctgctcggcctgcgccagcagcatgcggtggagctggcggcgaagaagtcgctgctg
gacaaggagctggagcagattccggatgggctgcgctcgcccgctgttgtgcgaagccgc
ttgcaggaacagcagcggctgtcgcagtcgctggaggccgcctggaaggaagccggcgag
cggctgcagcgggcgcggacggcggaggcggaggagcgggcgagtgccgcgcagctgctc
gcccggctcggagaagcggaggaaagcgcgcttcaggccgccgagcggtttgcatccgag
ctcgcggctgccgggttcggcggcaatcagtcttataaggaagcgaagctgtccgagcgg
gagcgccaggccggccgggagagtatcgaggcgtaccggacagaggcagcagcgctggca
caggccgttcgggaattggaacgggagctggccggcaagcagcggatcgatgtggagctg
ctcagcgcggagctcgccgcaacgaagcgcgagctggaggagaccgatgccgccctccgg
accgccgcgctgcttgcgggcagcgccgagcgtctcggcgccgcgatcgcggacgcccgc
aagcgctgcgcggagctggagtccgggcttgaggaggtcgccgatttgtacgcgatgctg
aaaggcgacaatccgctcaaaatttcgttcgagcggtacatcctgatcgaatttttggag
cagattttgcatgctgccaatgaaaggctgcgcgatctttcaaacgggcagttcgtgctg
gaacgcagcggccgcctggaaacaagaggcaagcagagcggcctcggtttggacgtctac
gacgcgtatacgggacaaaaccgggacgtgaagacgctgtccggcggcgagaaattcaat
gcgtcgcttgcgctcgcgctcggcatgacggacgtcatccaggcgcatcagggcggcatt
tccatcgaaatgatgtttatcgacgaaggcttcgggtcgctggacgaggaatcgctgaac
aaggcgattcttacgctgatcgatctgcagcgcgccggccggatgatcggcgtcatctcc
cacgtgcaggagctgaaacaggcgtttccggccgtactggaagtgaagaagacgaaggaa
ggccacagccggacggcgatttatttgaaataa
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