KEGG   Paenibacillus beijingensis: VN24_19285
Entry
VN24_19285        CDS       T03802                                 
Name
(GenBank) exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pbj  Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbj03400]
    VN24_19285
DNA repair and recombination proteins [BR:pbj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VN24_19285
    Archaeal homologous recombinant proteins
     VN24_19285
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 KASH_CCD nSTAND3
Other DBs
NCBI-ProteinID: AJY76317
UniProt: A0A0D5NMU2
LinkDB
Position
4276553..4279645
AA seq 1030 aa
MKPLSLTMTAFGPYRDAEKVDFGLLRDSRLFVITGSTGAGKTTIFDAICFALYGSASGED
RSETRMLRSHFADDETHTSVEFEFSVGVRSYRVFRQLAHRKGTNKSETGGKAELYETTSG
EPVPCVDRFAVSDVNAKLERIVGLTREQFSQIVMLPQGEFRKLLTSDTENKEDILRRLFQ
TGLFRKLEERFHRKHREMTDAVKESRAKVEFHLQQAEESLPLREESALAAALGQEHRSAL
QVMEGLAAEAAYYREVSGIAEARKTRLAAEVESRQLRVHEAAVLNGRLDELDGKRRQLAR
LAERKSELEALERRLALAEQASRLQPYEEQADKAAAEARMCRVRHEEKRLAAEAAAKTLA
QAEQAYRAEEAREPQRREAGRELERLGGLLPLVETLGERQAELERLGAQQRQLEAQLQAR
DEELGRLREVLRAGSEAAAKLEAEAAALPEKLELRSAMGEKYRLLKELTELKKRLDGFVE
LSGAREGAARLIRAEMDRMEALWIEGQAASLAAHLHEGEPCPVCGSVQHPGKAKSGGAVP
SREELQQAKERLRHAERELEEAKAQAAASREGWESGIAVMDRYGIVPDGLERQLSLLEHE
GKQLRAEIDRLKAQGEELSRLRAERKTLEERAERTGAEKERLLGLRQQHAVELAAKKSLL
DKELEQIPDGLRSPAVVRSRLQEQQRLSQSLEAAWKEAGERLQRARTAEAEERASAAQLL
ARLGEAEESALQAAERFASELAAAGFGGNQSYKEAKLSERERQAGRESIEAYRTEAAALA
QAVRELERELAGKQRIDVELLSAELAATKRELEETDAALRTAALLAGSAERLGAAIADAR
KRCAELESGLEEVADLYAMLKGDNPLKISFERYILIEFLEQILHAANERLRDLSNGQFVL
ERSGRLETRGKQSGLGLDVYDAYTGQNRDVKTLSGGEKFNASLALALGMTDVIQAHQGGI
SIEMMFIDEGFGSLDEESLNKAILTLIDLQRAGRMIGVISHVQELKQAFPAVLEVKKTKE
GHSRTAIYLK
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgaagccgctatcgctgacgatgaccgctttcgggccttaccgcgacgcggagaaggtc
gatttcgggctgctgcgggattcgcggctgttcgtcatcacgggcagcacgggcgcgggc
aagacgacgatttttgacgcgatctgctttgcgctgtacggatccgccagcggagaagac
cgttcggaaacgcggatgctgcgcagccattttgccgacgacgagacgcacacgtccgtt
gagttcgaattttcggtaggggtgcgctcctaccgcgtattccgccagctcgcccaccgc
aaagggacgaacaaaagcgagaccggcggcaaggccgagctgtacgagacgactagcggc
gaaccggttccgtgcgtcgaccggtttgcggtgtcggacgtcaacgccaagctggagcgg
atcgtcgggctgacccgggagcagttcagccaaattgtgatgctgccgcagggcgagttt
cgcaagctgctcacgtccgatacggagaacaaggaggatattttgcggcggctgttccag
acgggactgttccgcaagctggaggagcggtttcaccgcaagcaccgggagatgacggac
gccgtcaaagaaagccgcgccaaagtcgaatttcatctgcagcaggcggaggaaagcttg
ccgctccgggaggagagcgcgcttgccgccgcgctcgggcaggaacaccggagcgcgctg
caggtgatggaagggcttgccgccgaagcggcttattaccgggaagtttcggggattgcg
gaggcgcgcaagacgaggcttgcggcggaggtcgagtcccggcagctgcgcgttcacgag
gcggctgtgctgaacgggcggctcgacgagcttgacggcaagcggcggcagcttgcccgg
cttgccgagcgcaagagcgagctggaagcgctggagcggcggctcgcgcttgcggagcag
gcgtcgcggctgcagccgtacgaggagcaggccgataaggcggccgcggaagcccggatg
tgccgcgtccggcacgaggagaagcggcttgccgccgaggcggccgcgaagacgcttgcg
caggcggagcaggcttaccgcgccgaggaagcgcgcgagccgcagcgccgggaagccggc
cgcgagctggagcggctcggcggcctgctgccgctcgtggagacgctgggcgagcggcag
gcggagctggagcggctcggcgcgcagcagcggcagctcgaggcgcagctgcaggcgcgc
gacgaggagctggggcggctgcgggaggtgctgcgcgccggcagcgaagcggccgccaag
ctggaggcggaagcggctgctctgccggagaagctggagctgcgctcggcgatgggcgag
aagtacaggctgctgaaggaattgaccgagctgaagaaacgattggacggttttgtagag
ctgtccggcgcaagggaaggggcggcgcgtctcatccgcgcggagatggaccgcatggag
gcgctctggatcgaaggccaggcggcgtcgcttgccgcccatctgcatgagggcgagccg
tgcccggtttgcggcagcgtgcagcatccgggcaaagcgaaatcgggcggagcggtgccg
tcgcgggaagagctgcagcaggcgaaggagcggctgcgccacgcggaacgcgagctggag
gaggcgaaggcgcaggcggccgcgtcccgcgagggctgggaaagcggtatcgccgttatg
gaccggtacggcattgtgccggatgggctggagcggcagctttcccttctggagcatgaa
ggcaagcagctgcgcgcggagatcgaccgcttgaaggcacagggcgaagagctgagccgg
ctgcgcgcggagagaaagacactggaggagcgggcggaacggaccggggccgagaaggaa
cggctgctcggcctgcgccagcagcatgcggtggagctggcggcgaagaagtcgctgctg
gacaaggagctggagcagattccggatgggctgcgctcgcccgctgttgtgcgaagccgc
ttgcaggaacagcagcggctgtcgcagtcgctggaggccgcctggaaggaagccggcgag
cggctgcagcgggcgcggacggcggaggcggaggagcgggcgagtgccgcgcagctgctc
gcccggctcggagaagcggaggaaagcgcgcttcaggccgccgagcggtttgcatccgag
ctcgcggctgccgggttcggcggcaatcagtcttataaggaagcgaagctgtccgagcgg
gagcgccaggccggccgggagagtatcgaggcgtaccggacagaggcagcagcgctggca
caggccgttcgggaattggaacgggagctggccggcaagcagcggatcgatgtggagctg
ctcagcgcggagctcgccgcaacgaagcgcgagctggaggagaccgatgccgccctccgg
accgccgcgctgcttgcgggcagcgccgagcgtctcggcgccgcgatcgcggacgcccgc
aagcgctgcgcggagctggagtccgggcttgaggaggtcgccgatttgtacgcgatgctg
aaaggcgacaatccgctcaaaatttcgttcgagcggtacatcctgatcgaatttttggag
cagattttgcatgctgccaatgaaaggctgcgcgatctttcaaacgggcagttcgtgctg
gaacgcagcggccgcctggaaacaagaggcaagcagagcggcctcggtttggacgtctac
gacgcgtatacgggacaaaaccgggacgtgaagacgctgtccggcggcgagaaattcaat
gcgtcgcttgcgctcgcgctcggcatgacggacgtcatccaggcgcatcagggcggcatt
tccatcgaaatgatgtttatcgacgaaggcttcgggtcgctggacgaggaatcgctgaac
aaggcgattcttacgctgatcgatctgcagcgcgccggccggatgatcggcgtcatctcc
cacgtgcaggagctgaaacaggcgtttccggccgtactggaagtgaagaagacgaaggaa
ggccacagccggacggcgatttatttgaaataa

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