Paenibacillus beijingensis: VN24_19295
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Entry
VN24_19295 CDS
T03802
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_19295
Enzymes [BR:
pbj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VN24_19295
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
VN24_19295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_30
ResIII
Nbl1_Borealin_N
DNA_Packaging_2
Motif
Other DBs
NCBI-ProteinID:
AJY76319
UniProt:
A0A0D5NLW4
LinkDB
All DBs
Position
4283662..4287756
Genome browser
AA seq
1364 aa
AA seq
DB search
MNPVMPKPQGSTWTDDQWSAIVTEGSDVLVAAAAGSGKTAVLVERIIRKISADTDVDRLL
VATFTKAAASEMKERIRIALEKALESAPSSEHLRRQLALLGRANITTLHSFCLDVIRRYY
PLIGLDPGFRVANETESELMRIEVLDQLFEERYTEVRDGGAFLKLADRYGGEKGDDKLYH
LTQQLYDFSRSQPWPDHWLRQTADDFRIPDDEELANSKWTQSLENDVKLALHGAAGSLRE
ALALCKRPGGPDAYAVNLNEDLEAVEQLLVTVENDSWERWRDAFLSKGGFGRLKTMRGDD
HDKELQEQVKTLREQAKQIVAGLAEELFVRSSADYLAEMRNLAPLMSALAELVIDFGVRY
EEAKRAKGLLDFGDLEHFCLRILRDPASTPERTVPSAAALEYRNHFAEILLDEYQDTNRV
QEAIVELIAGSSPGNRFMVGDVKQSIYRFRLAEPALFLHKYKSYETGDDAEGRPMEADGA
EDGRNGTAWRTLDESAGTLNVPADTSDTGRTRQPGRRIDLARNFRSRDEVVDGVNDVFRA
LMRETVAEMDYDTRAELVRGAEYPPAPDAAKYAVELAVIDRGSEKASAEEGGTAAEEDEF
AGHDAAAKEAAADMQTAQLEARFIARRIMELKESGFTVYDSRKHSVRPLAWRDIVILLRA
QQQWSPVLIEELQQAGIPAYAELSTGYFEATEVNVMLSLLRIIDNPYQDIPLAGALRSPL
FDVSAEELALIRIQAGSGAYFDAVVKAADSLFTDEATRGKLSHFLDRLERWREAARQGPV
SDLIWSIYRETDYYDWVGGLVGGPQRQANLRALHDRARQYESTSLRGLFRFLRFIERMRE
SGGDLGTARAMGEGEDVVRIMSIHKSKGLEFPVVFVAGLGKMFNQQDVNASFLMHKDLGF
GPKYVHEGLRVTYPTLPFLAVRRRMMQEMQAEELRVLYVALTRPKEKLILLGTTADAARQ
LQRWQSAADAVGRLPDYSIASARRFLDWLGPLALRSGMNLSLVDAGRGDIDPPPAAGGAE
REAVLRNWLTRVVPSPSLGTEAAAGSESPEDDEEFRQRMQAVAELIPVPPENTDSEVERL
LGWEYPFAAASFVAAKTSVTEMKRIYAETSMNTDAVFHGEGPFVERFAASESESAVGADR
KAGAAGHKTPQREDFSGKTVPAASGPLPEGDGSYSYSFRLRRPRFMEEKSLTAAERGTVT
HTVMQHVPLAGSLTLEALHQTVAELIERRILTEPQAEAADLEAVERFFTSDLGVRLLRAD
RVNREVPFSCTFPASRVYPLSEAAIGGEPILIQGVIDCLFEEGGKLVLLDYKTDRVYDGD
WDKAGEKHRFQLELYAEAIRTIVGREVDECHLFFMNGPQAVRLR
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggttatgccaaagccgcaaggcagcacatggaccgacgaccagtggagcgcg
atcgtaaccgaaggctccgacgtgctggtcgcggctgcggcgggctccggcaaaacggcg
gtgcttgtcgagcggattatccgcaaaatttccgccgataccgatgtggaccggctgctc
gtcgccacgtttacgaaagcggccgcctcggaaatgaaggagcgcattcgcatcgcgctg
gagaaggcgctcgaatccgcgccctcgtcggagcatttgcgccgtcagctggcgctgctc
ggacgcgccaacattacgacgctgcactccttttgcctggatgtcatccgccgatattat
ccgctgatcggacttgacccgggcttccgggtggcgaacgaaacggaaagcgagcttatg
cggatcgaagtgctggatcagctgtttgaagagcgctacaccgaggtccgggacggcggc
gcctttttgaagcttgcggaccggtacggcggggaaaaaggcgacgacaagctgtaccat
ttgacgcagcagctgtacgatttttcgcgcagtcagccgtggcccgatcactggctgcgg
cagacggcggacgatttccgcatcccggacgatgaggagctcgcgaacagcaagtggacg
caatcgctggaaaatgacgtaaagcttgcgctccatggagctgccggctcgttgcgggaa
gcgctggcgctctgcaagcggcccggcggtcccgatgcgtacgcggtcaacttgaacgag
gatttggaagcggtggagcagctgctggtgaccgtggagaacgattcgtgggaacggtgg
cgggatgcgttcttaagcaagggaggcttcggacggctgaaaacgatgcggggcgacgat
cacgacaaagagctgcaggagcaggtgaagacgctgcgcgagcaggcgaagcaaattgtc
gccggtttggcggaggagctgtttgtaaggtcgtctgcggactatttggccgaaatgcgc
aacctggcgccgctcatgtccgcgcttgccgagcttgtgatcgatttcggtgtccgctat
gaggaggcgaagcgcgcgaaggggctgctcgacttcggcgatctggagcatttctgcctg
cgcatcctgcgcgatcccgcttccacgccggagcggacggttccttccgctgccgcgctg
gaataccggaatcattttgcggaaattttgctggatgaataccaggatacgaaccgggta
caggaagcgattgtagagctgatcgccggatcgtctccgggtaaccgattcatggttgga
gacgtgaaacagtcgatctaccgcttccggcttgctgagcctgccctttttctgcacaag
tacaagtcgtacgagacgggcgatgatgccgaagggaggccgatggaggctgacggagct
gaagacggccggaacgggaccgcctggagaaccttggacgaatcggccggcactttgaac
gttccagccgatacatcggacactggccgcactcgccaaccgggacgccgcattgatctg
gcccgcaatttccgcagccgcgacgaagtggtggacggggtcaacgatgtgttccgcgcg
ctgatgcgggagacggtggcggagatggattacgatacgcgtgcggagctggtgcgcgga
gcggaatatccgccggcgccggacgcggcgaaatatgcggtggagctggccgtcatcgac
cgcggcagcgaaaaagcgtccgcggaagagggcggtaccgccgccgaagaagacgagttt
gccggccatgacgcagcggcgaaggaggcggcggccgacatgcagacggcgcagctggag
gcgcgcttcatcgcccgccggattatggagctgaaggagagcggatttaccgtctacgac
agccgcaagcattcggtccggccgctcgcctggcgcgatatcgtcattttgcttcgcgcc
cagcagcaatggtcgccggtgctgatcgaggagctgcagcaggcgggcataccggcatac
gcggagctgagcaccgggtattttgaagcgacggaagtgaacgtcatgctgtccctgctg
cggattatcgacaatccgtatcaggatattccgcttgcgggagcgctccgctccccgctg
ttcgacgtaagcgccgaggaactggccctcatccgcatccaggcgggaagcggcgcctat
ttcgacgcggttgtgaaagcggcggacagcctgtttacggacgaagcgacgcgcggcaag
ctgtcccactttcttgaccgcttggaacgctggcgcgaagcggcccggcaaggcccggtc
agcgatctcatctggagcatctaccgcgagacggattactatgattgggtcggcggcctg
gtcggcggcccgcagcgccaggccaacttaagggcgctgcatgaccgggcgcggcagtac
gagtcgacgtcgctgcgcggcttgttccgctttctcaggttcattgagcggatgagggag
agcggcggcgatctgggcacggcccgcgctatgggggaaggggaggacgtggtccgcatc
atgtccatccataagagcaaggggctggagttcccggtcgtgttcgtggccggcctcggc
aaaatgttcaaccagcaggatgtgaatgcttcgttcttaatgcataaagatctcgggttc
ggccccaaatatgttcacgaggggctccgggtgacttatccgacgctgcctttccttgcc
gtccgccgaagaatgatgcaggagatgcaggcggaagaactgcgggtgctgtatgtggcg
ctgacgcgtccgaaggaaaagttaattctgctcggcacgaccgccgacgccgcccgccag
cttcaacggtggcagtccgccgcggatgccgttggacggctgccggattacagcatcgct
tcggccagacgctttctggactggctcggaccgctcgcgctgcgcagcggcatgaatctg
tcgcttgttgacgcggggcggggcgatattgatccgcctccggctgcgggcggcgcggag
cgggaagcggtgctgcggaactggctgacccgcgtcgttccgtctccttctctcgggacg
gaggcggcggcaggcagcgaatctcccgaagacgatgaagagttccggcagcggatgcag
gcggtcgcggagctcattccggtgccgcccgagaacaccgattcggaagtggagcgtctg
ctcggctgggagtatccgtttgcggccgcttccttcgtcgcggccaaaacgtcggtgacg
gaaatgaagcggatctatgcggagacgtcgatgaacacggacgccgtctttcacggcgag
gggccgttcgtggaacggtttgcggcgtcggaatcggaaagcgccgtcggcgccgatcgc
aaagccggagcggccgggcataagacgccgcagcgtgaggacttctccggcaagacggtt
ccggcagcaagcggcccccttcccgaaggggatggctcctactcctactccttccggctg
cggcggccgcgctttatggaagagaagtcgcttacagccgccgagcgcggaacggttacc
cacaccgtcatgcagcatgtgccgcttgccggctccttgactctcgaggcgctgcatcag
acggtggcggaattgatagagcgacggatattgacggaaccacaggcggaagcggccgat
ctggaagcggtcgaacgttttttcacatccgacctcggggtcaggctgttgcgcgccgac
cgcgtgaaccgcgaagtgccgttcagctgcacgtttccggcttcccgcgtgtacccttta
tcggaagcggcgatcggcggcgaaccaatcctcattcaaggcgtcatcgactgtctgttc
gaagaaggaggaaagcttgtcctgctcgactacaagacggaccgggtatatgacggggat
tgggacaaagcgggggaaaagcatcgttttcagcttgagctgtacgcggaagcgatccgg
acaatcgtcggccgggaggtggacgagtgccacctgttcttcatgaacggtcctcaggcg
gtgcgcttgcggtaa
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