Paenibacillus beijingensis: VN24_19550
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Entry
VN24_19550 CDS
T03802
Name
(GenBank) stage V sporulation protein D
KO
K08724
penicillin-binding protein 2B
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj00550
Peptidoglycan biosynthesis
pbj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VN24_19550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbj01011
]
VN24_19550
Peptidoglycan biosynthesis and degradation proteins [BR:
pbj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VN24_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AJY76361
UniProt:
A0A0D5NM75
LinkDB
All DBs
Position
4337809..4340112
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AA seq
767 aa
AA seq
DB search
MVKRIRMRTLLVGGIMTLLFLILLTKMFWVQVIKADFWFEHAKKTWAAAETIPAARGTIT
DRDGNVLAMDTNAYTVAVNPKLIHQLAIEDEVVEKLHDLLNKPESELREIVTARNDKGEY
YVDRQVRPEGWNIDKATADKVTAFKEELKEELKRRGHKKVDDVGIRLLDGSKRYYPKNSL
ASQVIGYVNKEGNAVIGAEAAFDKELKGQNGHLVYEKDGNRVQIENGNVDYQPAIEGKKI
ALTIDTEIQYYMEEALKEAYDKYQPVSITAVAADPNTMEILGIANLPGYNPNSYSTANTA
SFYNHAVGSLYEPGSTFKIVTLAGAVQEGDFNPEEKYMSGSIKVANDPRPIRDIKRDGWG
QITFLEGLKRSSNVAFVKLGYERLGREKLMSYIKDFGFGSKTGIELKGESKGIVDFYWPK
EVATAAFGQGKVLVTPIQQVAAVAAVANGGKLMEPHIVKQIEDPQTGKTQVTQPKIVRQV
ISPETSKKVSGYLEQVVADQEIGTGKNAYIKGYRVAGKTGTAQKVINGEYSSDKFVVSFI
GYAPVDNPKIVVYVVVDSPNNPVVGGGTVAAPIFKKIVSQSLRHMGVQPKLTASEKQSGA
EMTVTVPDLSDLNVSQAAAELKARGLTPEKVGKGTKVIQQIPKSGTVISASQRIYLITEE
RSKLTVPGMKGLALRDALEVCSLLGIRCLTEGEGYVTAQAAAKLNGEPVIKLTLQPPVQV
EAGADGSEASSQNGSRESAGQESGAAGTAGKTDRSDSGNEEAGSGDG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacgaattagaatgcgcacgctgctcgtcggagggatcatgaccctccttttt
cttattttgctgacgaagatgttttgggttcaagtcattaaagccgatttctggttcgag
cacgcgaaaaaaacatgggcggccgccgagacgatacccgcagcccggggcacgattacc
gacagggacggcaatgtgctggcgatggatacgaacgcttacaccgtagccgtcaatccg
aagctcattcaccagctggccattgaggatgaagtggtagagaagctgcacgacctgctg
aacaagcctgaaagcgagctgcgagaaatcgtcaccgcccgcaatgataagggtgaatat
tatgtagaccggcaagtccggcccgaaggctggaacatcgacaaagcgacggcggacaag
gtgacggcgttcaaggaagagctgaaggaagagctgaagcggcggggccacaagaaggtt
gatgatgtcggcattaggctgctggacggatcgaaacgctattatccgaaaaattccctt
gcttcgcaggtgatcggctacgtaaacaaggaaggcaatgcggttataggtgctgaagcg
gcttttgataaagagctgaaagggcagaatggacatctggtgtacgagaaagacggcaac
cgcgtccagatcgagaacggtaacgtagactatcagcctgcaatcgagggtaaaaagatt
gcgctgacgatcgataccgaaattcagtattacatggaagaagcgcttaaggaagcgtac
gacaagtatcagccggtcagcatcaccgctgtggcggccgatccgaacacgatggaaatt
ttgggtatcgccaatctgcccggatataacccgaactcctattcaacggcgaatacggcc
agcttttacaaccatgcggtaggatcgctgtacgagcccggttcaactttcaaaatcgta
acgcttgccggcgcggtgcaggagggggactttaaccccgaagagaagtatatgtcgggt
tcgatcaaagtagccaacgatccgcggccgatccgcgatatcaagcgggacggctgggga
caaatcacctttctggaagggcttaagcgctccagtaacgtagctttcgtcaagctcggc
tacgaacggctgggccgggaaaagctgatgagctatattaaggacttcgggtttgggtca
aaaaccggcatcgagctcaaaggggaatccaaagggatcgtcgacttttactggccgaag
gaggttgcgacggcggcgttcggtcaaggtaaagtactcgtgaccccgatccagcaggtt
gcggctgtagcggctgtcgccaacggcggcaagctgatggagccgcacatcgtgaagcag
atcgaagatccgcagacaggaaagacgcaagtgacccagccgaagatcgtccgtcaggtc
atttcgcccgaaacgtcaaagaaggtgagcggttatttggaacaggtcgttgcggatcag
gagatcggcacgggtaaaaacgcttatatcaaaggttaccgcgttgccggcaaaaccggt
acggcgcagaaagttatcaacggcgaatactccagcgataagtttgtcgtctcctttatc
ggctatgctccggtcgataacccgaagattgtcgtatacgtcgtcgtcgactctccgaac
aacccggtcgtaggcggaggaacggttgcggcgcctatttttaaaaagattgtcagccag
agcctgcgccatatgggagtccagccgaagctgaccgcttccgagaaacaatccggtgcg
gagatgacggtaacggttccggatttatccgaccttaatgtgtctcaggctgccgccgag
ctgaaagcgcgcggattgacgccggagaaggtcggcaaagggacgaaggtcattcagcaa
attccgaaatcggggactgttatttccgcttcccagcgaatctatctgataacggaagag
cggagcaagctgactgttcccggcatgaagggccttgcgctgcgcgacgccctcgaggta
tgctcgctgctcggcatccgctgcttgaccgaaggcgaaggatacgtcaccgcccaggca
gcggccaagctgaacggagaaccggtcatcaagctgacgctgcagccgccggtacaggta
gaggccggggcggacggaagtgaagcgtcctcacagaacgggagccgggagtccgccgga
caggaaagcggcgctgccggtaccgcgggtaagacagatcgctccgatagcggaaatgag
gaagccggttccggagacgggtaa
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