Paenibacillus beijingensis: VN24_19560
Help
Entry
VN24_19560 CDS
T03802
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj00550
Peptidoglycan biosynthesis
pbj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VN24_19560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbj01011
]
VN24_19560
Peptidoglycan biosynthesis and degradation proteins [BR:
pbj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VN24_19560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AJY76363
UniProt:
A0A0D5NN59
LinkDB
All DBs
Position
4340461..4342410
Genome browser
AA seq
649 aa
AA seq
DB search
MKVSSVTVRRRLFAALVLIVVAFAALVVRLGYVQLAEGKELSAKAEDSWRREIPFAAKRG
EITDRNGVKLAYNVSSPSIMALPAQVKDAPGTAEKLAAVLGMDKNKLLTMITKRQMIVKI
QPEGRKLTTEKAAEVRKLALPGIVVAEDNKRYYPFGNLAASVLGITGIDKGLTGVEASYN
NLLSGINGSISFLSDARGTTMPGSSDKYRQPKDGLTMELTIDKQIQTIMERELDQAMEKY
QADQMLAIAMDPNTGEVLGMASRPTFEPGNYNAFPSELYNRNLPIWMTYEPGSTFKIITL
AAALEEGKVNLKNERFFDPGAIEVGGARLRCWKKGGHGSQTFLEVVQNSCNPGFVTLGQR
LGKEKLFQYIKNFGFGTKTGIDIGGEENGILFKLNRVGPVELATTAFGQGVSVTPIQQIA
AVSAAINGGTLYKPHVAKAWINPETGETVKTVEPEAVRNVISENTSGQVREALESVVAQG
TGGNAFIDGYRVGGKTGTAQKVINGRYSSSEHIVSFIGFAPADNPKIVIYVAVDNPQGIQ
FGGVVAAPIVRNMMDDALQYMGVPRSKEQIGKKYKLGETPVVTVPNLVGKTVSDIYEDMN
MNFNLTSAGTGNTVIRQAPAAGERVDKGSTIRIYLGSEADLGDADSHRH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatccagtgtaacggtgaggcgccggctgtttgcggcgcttgttcttatcgtt
gtcgcattcgcggcgcttgtcgtccggcttggatacgtgcagctcgccgaagggaaggag
ctgtcggcgaaggcggaagattcgtggcggcgggaaattccgtttgcggccaagcgcggt
gaaattaccgaccgcaacggcgtcaagctcgcgtacaacgtaagctctccctcgattatg
gctttgccggctcaggtgaaggacgcgcccggaactgccgagaagctggcggccgtgctt
ggcatggataaaaataaattactaacgatgatcacgaagcgacaaatgatcgtcaagata
cagcccgaaggccgcaagctgacgacggagaaagcggccgaggtgcgcaagctggcactg
cccggcatcgttgtggccgaagacaacaagcgctattatccgtttggcaatctcgccgcc
agcgtgcttggcattaccggcatcgataaagggttgaccggtgtggaagcgagctacaac
aatctgctcagcggcatcaacggcagcatctcgtttttgtccgacgccaggggaacgaca
atgccggggtcatccgacaagtaccggcagccgaaagacggcctgacgatggagctgacg
atcgacaaacaaatccagaccattatggagcgcgagctggatcaggcgatggagaaatac
caggcggaccagatgcttgcgattgccatggatccgaacacgggagaggtgctggggatg
gccagccggcccacgttcgaaccgggaaactataatgcgtttccttccgagctgtacaac
cgcaatctgccgatttggatgacgtacgagccggggtccaccttcaaaatcattacgctg
gcggcggcgcttgaggaagggaaagtcaatttgaaaaacgagcgtttcttcgaccccgga
gcgatcgaggtgggcggagcgaggctgcgctgctggaaaaaaggcggccacggcagccag
acgtttctggaagtggtgcaaaactcctgcaaccccggatttgtcacactggggcagagg
cttggcaaggagaagctgttccagtatattaaaaacttcggtttcggcacgaaaaccggc
atcgatatcggcggcgaggaaaacggcattttgttcaaattgaaccgtgtcggtccggtc
gaactggcgacaacggcgttcggccagggggtatcggttacgccgatccagcagattgct
gccgtatcggcggcgattaacggcggcacgctgtacaaaccacatgtggccaaagcatgg
atcaatccggaaaccggcgaaaccgtgaaaaccgtagagccggaagcggtgcgcaacgtt
atttccgagaacacgtcggggcaggtgcgcgaagcgctggagagcgttgtcgcccaaggc
accggcggcaacgcgtttatcgacggttatcgggtcggcggcaaaaccggcaccgcgcaa
aaggtcatcaacggacgctactcctcgagcgagcatatcgtatcgttcatcggattcgcg
ccggcggacaatccgaagatcgtcatctacgtggcggtcgacaatccgcagggcatccag
ttcggcggcgtcgtcgccgcgccgatcgtccgcaacatgatggatgacgcgctgcagtat
atgggcgtgccaagaagcaaagagcagatcggcaaaaaatataagctcggcgagacgccg
gttgtgaccgtaccgaatttggtaggcaaaaccgtatccgatatctatgaggatatgaat
atgaatttcaacctcacctccgcagggacgggcaatacggtcatccgccaagcgccggcg
gcgggcgagcgcgtagacaaaggctccaccatccggatttatctcggaagcgaagccgat
ctgggcgatgcggattcgcaccggcactag
DBGET
integrated database retrieval system