Paenibacillus beijingensis: VN24_19580
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Entry
VN24_19580 CDS
T03802
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj00470
D-Amino acid metabolism
pbj00550
Peptidoglycan biosynthesis
pbj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VN24_19580 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VN24_19580 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbj01011
]
VN24_19580 (murD)
Enzymes [BR:
pbj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VN24_19580 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbj01011
]
Precursor biosynthesis
Amino acid ligase
VN24_19580 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
LpxK
Motif
Other DBs
NCBI-ProteinID:
AJY76367
UniProt:
A0A0D5NMY1
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All DBs
Position
4347069..4348562
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AA seq
497 aa
AA seq
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MEQPASYRNRKVVVLGLARSGVSVAKVFHSLGADVIVNDQKARELCPEADELAALGISVL
CGGHPADLIDGETALLVKNPGIPYSAPPVRQALELGVEVVTEVEVAGMLSPAPIIGITGS
NGKTTTTTWIGKLLEAAGMKPIVAGNIGRPLCEAALEAEADNILVAELSSFQLKGTSKFR
PRVGLLLNIAETHLDYHGGMEDYVASKAKLFANQTEEDTAVLNADDEECRKLAAALRANQ
LPFSLYSRLDKGVFIEPPYPVPAAASAADAASSGSGRAAAANGQPDGAELQRSIVYRDEN
GAETVILPVNELGIPGRHNAANALAAIAGCIAAGAEPHGLAAPLREFRGVEHRLEFVREM
GGVSYYNDSKATNPVATTMSVGSLKAPIVLVAGGLDRGSDYMELLPLFRSGKIKALVLLG
QTGAKLAHVAELAGLSSVVIVEPEEDAESTLRRAVREAASLAEEGDAVLLSPACASWDMF
PSYEVRGRIFKESAHTL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccggcttcttaccggaaccggaaggtcgtcgtactcggccttgccagaagc
ggcgtcagcgttgcgaaagtgtttcattcgctgggcgccgatgtaatcgtgaacgaccaa
aaggcaagagaactgtgtcccgaagcggacgaactggccgctttgggcatttctgtgctg
tgcggaggccatccggccgatttgatcgatggagaaacggcgctgcttgtcaaaaatccg
ggcatcccctattcggctccgccggtgcgtcaagcgctggagcttggcgttgaggtcgta
acggaagtggaagtggcaggtatgctgtctcctgcacccatcatcggcattaccggctcg
aacggcaaaacgacgacgacgacatggatcggcaagctgctggaagctgccgggatgaaa
ccgatcgtcgccggcaacatcggccgcccgctctgcgaagccgcgcttgaggcggaagcg
gataatattctcgtcgccgagctgagcagctttcagcttaagggtacttcgaagttccgt
ccgcgtgtcggactgctgctgaacatcgccgagacgcatctggattaccacgggggaatg
gaagactacgttgcatccaaggcgaagctgtttgcgaaccagacggaagaggacacagcc
gttctcaatgccgacgacgaggaatgccgcaagctcgcggcagcgctgcgggcaaatcag
cttccgttctcgctctattcaaggctggacaaaggcgtctttatcgagccgccgtatccg
gtgcccgccgcagcttcggcagcggatgccgcttcaagcggcagcgggagggcggctgcc
gcaaacgggcagccggatggcgccgagctgcagcgcagcatcgtataccgcgacgaaaac
ggcgcggaaacggttattctgccggtgaacgagctcggaattcccggccgacacaatgcg
gcgaatgcgctcgcggccattgccggctgtatcgctgccggtgcggagccgcacgggctt
gcggcgccgctgcgggaattcagaggcgtggagcatcggctcgaatttgtccgtgaaatg
ggcggcgtgtcgtattacaacgattccaaagcgacgaatccagtcgccacgacaatgtcg
gtcggatcgctcaaagcaccgatcgtgctcgttgcggggggactggaccggggctcggac
tatatggagctgctcccgctgttccgttccggaaaaatcaaagcgctggtcttgctggga
caaacgggcgcaaagctggcgcatgtagcggagcttgcgggtttatcttcggtcgttatc
gtcgaacctgaagaggacgccgaatctacgctgcgccgcgcggtgcgggaagcggcctcg
cttgcggaagaaggggacgccgttctgctttctccggcctgcgcaagctgggacatgttt
ccttcctatgaagtgcgcgggcgcatttttaaagaatcggcgcataccttgtaa
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