KEGG   Paenibacillus beijingensis: VN24_19805
Entry
VN24_19805        CDS       T03802                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pbj  Paenibacillus beijingensis
Pathway
pbj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pbj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VN24_19805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbj03400]
    VN24_19805
Enzymes [BR:pbj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     VN24_19805
DNA repair and recombination proteins [BR:pbj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     VN24_19805
 Prokaryotic type
     VN24_19805
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AJY76402
UniProt: A0A0D5NN14
LinkDB
Position
4394274..4395005
AA seq 243 aa
MTAIFHNDWGAVLDNELKEPYYRELRSVLADKYRTRTVYPDMHHIFNALHYTSLADTKIV
ILGQDPYHGPRQAHGLSFSVQPGVKIPPSLQNIFKELREDIGCPIPGSGDLTAWAKRGVL
LLNTVLTVEAGAAASHQGIGWEQFTDRIISVLNERKEPVVFILWGKHAQEKAAFIDKSRH
CVIASPHPSPFAAHRGFFGSRPFSRANAFLRSIGREEIQWCLSSSSAVLQGDETDNGQAS
GIG
NT seq 732 nt   +upstreamnt  +downstreamnt
atgacagccatttttcataacgattggggagctgtactcgacaatgagttgaaagagcct
tattaccgggagcttcgctccgtattggcggacaaataccggacgcgaaccgtttatccg
gatatgcaccatatttttaacgcgctgcattacacttcattagccgatacgaagatcgtt
attctcggtcaagacccgtatcatggcccgcgtcaggcgcacggtctgagcttctcggtc
cagccgggggtgaaaattccgccttcgctgcaaaacattttcaaagaactgcgggaagat
atcggctgtccgataccgggcagcggcgatttgaccgcatgggcgaaaagaggcgtgctg
ctgctgaatacggtgcttacggtagaagccggggcggccgcgtcgcatcaaggaatcggc
tgggaacaattcacagaccgcatcatctcggttttgaacgagcggaaggagcctgtcgtg
tttattttgtggggcaagcatgctcaggaaaaagcggcgttcattgacaagtcccggcat
tgcgtcatcgcttcgccgcatccgagtccgtttgccgcgcaccgcggtttcttcggcagc
cggccgttctcgcgcgccaacgcttttctgcgcagtatcggcagggaggaaatacagtgg
tgcctttcgtcatccagtgcggttctgcagggggacgaaacggacaacggtcaggcatcg
ggtatcggatga

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