Paenibacillus beijingensis: VN24_24770
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Entry
VN24_24770 CDS
T03802
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbj03032
]
VN24_24770
03036 Chromosome and associated proteins [BR:
pbj03036
]
VN24_24770
03400 DNA repair and recombination proteins [BR:
pbj03400
]
VN24_24770
DNA replication proteins [BR:
pbj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VN24_24770
Chromosome and associated proteins [BR:
pbj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VN24_24770
DNA repair and recombination proteins [BR:
pbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VN24_24770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Rpf1_C
HU-CCDC81_euk_1
HU-DNA_bdg
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
AJY77177
UniProt:
A0A0D5NQC4
LinkDB
All DBs
Position
complement(5482257..5482535)
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AA seq
92 aa
AA seq
DB search
MNKADLITKVAEATELSKKDATKAVDAVFDAISDALQSGDKVQLVGFGNFEVRERQARKG
RNPQTGEEIDIAASKMPAFKPGKSLKDLVSGE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggatttgattacgaaagtggctgaagcaacggaattgtccaaaaaagac
gcaacgaaagcagtagatgcggtttttgacgcgatttccgacgcgctgcaaagcggcgac
aaagttcaattggtcggcttcggcaacttcgaggttcgggaacgtcaggcgcgtaaaggc
cgcaacccgcaaaccggagaagaaatcgatattgcagcaagcaaaatgcctgcgtttaaa
ccggggaaatcgttgaaagacctggtgtcgggcgaataa
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